RNA–Protein interactions for RNA: ENST00000344770.6

PDZK1-201, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZK1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-201ENST00000344770 LTN1O94822 1766 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 TNS1Q9HBL0 1735 aaKnown RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 POU5F1Q01860 360 aaKnown RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 RSPH1Q8WYR4 309 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 UPF2Q9HAU5 1272 aaKnown RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 NOL7Q9UMY1 257 aaKnown RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 R3HCC1Q9Y3T6 440 aaKnown RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 MYOM1P52179 1685 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 IGHDP01880 384 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 SLKQ9H2G2 1235 aaPredicted RBP11.74□□□□□ -0.53
PDZK1-201ENST00000344770 DONSONQ9NYP3 566 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
PDZK1-201ENST00000344770 OVOS2A0A0G2JMS6 1433 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
PDZK1-201ENST00000344770 CBFA2T2O43439 604 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 CAPN2P17655 700 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 DDB1Q16531 1140 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 C22orf23Q9BZE7 217 aa11.73□□□□□ -0.53
PDZK1-201ENST00000344770 ABCD1P33897 745 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 MFSD4BQ5TF39 518 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 MAP3K20Q9NYL2 800 aaKnown RBP11.72□□□□□ -0.53
PDZK1-201ENST00000344770 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
PDZK1-201ENST00000344770 CCDC189A1A4V9 331 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 KIF3CO14782 793 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 TRIM37O94972 964 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 ZBTB9Q96C00 473 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
PDZK1-201ENST00000344770 NUCKS1Q9H1E3 243 aaKnown RBP11.72□□□□□ -0.53
PDZK1-201ENST00000344770 CXorf56Q9H5V9 222 aa11.72□□□□□ -0.53
PDZK1-201ENST00000344770 PEAK1Q9H792 1746 aa11.71□□□□□ -0.53
PDZK1-201ENST00000344770 IPO5O00410 1097 aaKnown RBP11.71□□□□□ -0.53
PDZK1-201ENST00000344770 CASQ1P31415 396 aa11.71□□□□□ -0.53
PDZK1-201ENST00000344770 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 TRIM6-TRIM34B2RNG4 842 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 FYB1O15117 783 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 TPM3P06753 285 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 VDRP11473 427 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.54
PDZK1-201ENST00000344770 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.71□□□□□ -0.54
PDZK1-201ENST00000344770 ANKRD24Q8TF21 1146 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 IP6K1Q92551 441 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 TRIM34Q9BYJ4 488 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.54
PDZK1-201ENST00000344770 RTL1A6NKG5 1358 aa11.7□□□□□ -0.54
PDZK1-201ENST00000344770 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
PDZK1-201ENST00000344770 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
PDZK1-201ENST00000344770 TNS2Q63HR2 1409 aa11.7□□□□□ -0.54
PDZK1-201ENST00000344770 DZIP3Q86Y13 1208 aaKnown RBP11.7□□□□□ -0.54
PDZK1-201ENST00000344770 INO80BQ9C086 356 aaPredicted RBP11.7□□□□□ -0.54
PDZK1-201ENST00000344770 NLRP2Q9NX02 1062 aa11.7□□□□□ -0.54
PDZK1-201ENST00000344770 FAM208AQ9UK61 1670 aaKnown RBP11.7□□□□□ -0.54
PDZK1-201ENST00000344770 BCL9O00512 1426 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 KIF20BQ96Q89 1820 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 IFT88Q13099 833 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 TBC1D10BQ4KMP7 808 aaPredicted RBP11.69□□□□□ -0.54
PDZK1-201ENST00000344770 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 GGNBP2Q9H3C7 697 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 SUN2Q9UH99 717 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 APBA3O96018 575 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 ENOX1Q8TC92 643 aaKnown RBP11.69□□□□□ -0.54
PDZK1-201ENST00000344770 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
PDZK1-201ENST00000344770 SKILP12757 684 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 GTF2F1P35269 517 aaKnown RBP eCLIP11.68□□□□□ -0.54
PDZK1-201ENST00000344770 NASPP49321 788 aaPredicted RBP11.68□□□□□ -0.54
PDZK1-201ENST00000344770 MNS1Q8NEH6 495 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 SCYL1Q96KG9 808 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 CARD14Q9BXL6 1004 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 TBC1D2Q9BYX2 928 aa11.68□□□□□ -0.54
PDZK1-201ENST00000344770 HOXC9P31274 260 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 AMPHP49418 695 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
PDZK1-201ENST00000344770 HSCBQ8IWL3 235 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 MARCH10Q8NA82 808 aaPredicted RBP11.67□□□□□ -0.54
PDZK1-201ENST00000344770 MYRIPQ8NFW9 859 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 GBP4Q96PP9 640 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 CAMKK2Q96RR4 588 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 BICDL2A1A5D9 508 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 ERICH4A6NGS2 130 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 IL2RBP14784 551 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 EZH2Q15910 746 aaKnown RBP11.67□□□□□ -0.54
PDZK1-201ENST00000344770 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 FAM117AQ9C073 453 aa11.67□□□□□ -0.54
PDZK1-201ENST00000344770 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 NAT2P11245 290 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 HSP90B2PQ58FF3 399 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 PDILTQ8N807 584 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 SEZ6LQ9BYH1 1024 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 ZKSCAN5Q9Y2L8 839 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 ZMYND10O75800 440 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 PSMD2Q13200 908 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 PDLIM2Q96JY6 352 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 PAGR1Q9BTK6 254 aa11.66□□□□□ -0.54
PDZK1-201ENST00000344770 RREB1Q92766 1687 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms