RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 CCT2P78371 535 aaKnown RBP12.37□□□□□ -0.43
CCDC18-201ENST00000343253 TRIM27P14373 513 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 PTGS1P23219 599 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 EVCP57679 992 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 NLRP5P59047 1200 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 HDAC1Q13547 482 aaPredicted RBP12.37□□□□□ -0.43
CCDC18-201ENST00000343253 AFAP1L1Q8TED9 768 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 NEK1Q96PY6 1258 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 ANAPC4Q9UJX5 808 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 SERPINA10Q9UK55 444 aa12.37□□□□□ -0.43
CCDC18-201ENST00000343253 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC18-201ENST00000343253 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
CCDC18-201ENST00000343253 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
CCDC18-201ENST00000343253 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 ATAD2Q6PL18 1390 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-201ENST00000343253 MAP2K2P36507 400 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 F13A1P00488 732 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 PCK1P35558 622 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 GRIPAP1Q4V328 841 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
CCDC18-201ENST00000343253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.36□□□□□ -0.43
CCDC18-201ENST00000343253 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
CCDC18-201ENST00000343253 ATP11AP98196 1134 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 STMN2Q93045 179 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 SPG7Q9UQ90 795 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 TTC21AQ8NDW8 1320 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 PSMA7O14818 248 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 NBPF7P0C2Y1 421 aaPredicted RBP12.35□□□□□ -0.43
CCDC18-201ENST00000343253 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 SELENOSQ9BQE4 189 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 RRAGDQ9NQL2 400 aaPredicted RBP12.35□□□□□ -0.43
CCDC18-201ENST00000343253 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
CCDC18-201ENST00000343253 PRC1O43663 620 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 TNNC1P63316 161 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 MAP3K12Q12852 859 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 CCDC42Q96M95 316 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
CCDC18-201ENST00000343253 PTPRCP08575 1304 aa12.35□□□□□ -0.43
CCDC18-201ENST00000343253 LMOD1P29536 600 aaPredicted RBP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 CABP4P57796 275 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 MYL6BP14649 208 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 SH3BGRP55822 239 aaPredicted RBP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 TSNAXIP1Q2TAA8 658 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 CATIPQ7Z7H3 387 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 RHOXF2BP0C7M4 288 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 RHOXF2Q9BQY4 288 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 ZNF569Q5MCW4 686 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 INTS8Q75QN2 995 aaKnown RBP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
CCDC18-201ENST00000343253 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
CCDC18-201ENST00000343253 METTL24Q5JXM2 366 aa12.33□□□□□ -0.43
CCDC18-201ENST00000343253 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.43
CCDC18-201ENST00000343253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.43
CCDC18-201ENST00000343253 VCXQ9H320 206 aa12.33□□□□□ -0.43
CCDC18-201ENST00000343253 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.43
CCDC18-201ENST00000343253 CABP1Q9NZU7 370 aa12.33□□□□□ -0.43
CCDC18-201ENST00000343253 ABCF2Q9UG63 623 aa12.33□□□□□ -0.43
CCDC18-201ENST00000343253 IGHDP01880 384 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 PPP4R3AQ6IN85 833 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 VCX3BQ9H321 246 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 MKNK2Q9HBH9 465 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 PUF60Q9UHX1 559 aaKnown RBP12.33□□□□□ -0.44
CCDC18-201ENST00000343253 MPHOSPH10O00566 681 aaKnown RBP12.33□□□□□ -0.44
CCDC18-201ENST00000343253 NUCB1Q02818 461 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
CCDC18-201ENST00000343253 LARP6Q9BRS8 491 aaKnown RBP12.33□□□□□ -0.44
CCDC18-201ENST00000343253 BTBD11A6QL63 1104 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 ATP6V1AP38606 617 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 IGHMBP2P38935 993 aaKnown RBP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 MYCBPQ99417 103 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 SPTY2D1Q68D10 685 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 RIOK3O14730 519 aaKnown RBP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 CCDC38Q502W7 563 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 CROCCP2Q86T23 111 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 RNF168Q8IYW5 571 aaPredicted RBP12.32□□□□□ -0.44
CCDC18-201ENST00000343253 MAP7D1Q3KQU3 841 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 JAKMIP2Q96AA8 810 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 COMMD10Q9Y6G5 202 aa12.32□□□□□ -0.44
CCDC18-201ENST00000343253 GNAT3A8MTJ3 354 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 ATP5DP30049 168 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 DNM1Q05193 864 aaKnown RBP12.31□□□□□ -0.44
CCDC18-201ENST00000343253 NCOA7Q8NI08 942 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 RAB3IL1Q8TBN0 382 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 NKIRAS1Q9NYS0 192 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 GUCA1BQ9UMX6 200 aa12.31□□□□□ -0.44
CCDC18-201ENST00000343253 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
CCDC18-201ENST00000343253 BUB1BO60566 1050 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms