RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 COPS6Q7L5N1 327 aa16.58■□□□□ 0.24
PCDH8-201ENST00000338862 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.24
PCDH8-201ENST00000338862 ZNF215Q9UL58 517 aaPredicted RBP16.58■□□□□ 0.24
PCDH8-201ENST00000338862 MARCKSP29966 332 aaPredicted RBP16.57■□□□□ 0.24
PCDH8-201ENST00000338862 CPS1P31327 1500 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 USP27XA6NNY8 438 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 XAGE3Q8WTP9 111 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 MAP3K5Q99683 1374 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 URI1O94763 535 aaPredicted RBP16.57■□□□□ 0.24
PCDH8-201ENST00000338862 RXRAP19793 462 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 EIF4A1P60842 406 aaKnown RBP16.57■□□□□ 0.24
PCDH8-201ENST00000338862 TIMM10P62072 90 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 TFCP2Q12800 502 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
PCDH8-201ENST00000338862 C11orf57Q6ZUT1 292 aaPredicted RBP16.57■□□□□ 0.24
PCDH8-201ENST00000338862 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 KIF18AQ8NI77 898 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 SYT10Q6XYQ8 523 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 KIAA1210Q9ULL0 1709 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 A0A087WZG4 1122 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 RAPGEF4Q8WZA2 1011 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 DBNDD2Q9BQY9 259 aa16.56■□□□□ 0.24
PCDH8-201ENST00000338862 CFAP100Q494V2 611 aa16.55■□□□□ 0.24
PCDH8-201ENST00000338862 KSR2Q6VAB6 950 aa16.55■□□□□ 0.24
PCDH8-201ENST00000338862 NAT10Q9H0A0 1025 aaKnown RBP16.55■□□□□ 0.24
PCDH8-201ENST00000338862 PRDM4Q9UKN5 801 aa16.55■□□□□ 0.24
PCDH8-201ENST00000338862 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
PCDH8-201ENST00000338862 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCDH8-201ENST00000338862 DMTNQ08495 405 aa16.55■□□□□ 0.24
PCDH8-201ENST00000338862 MAP2P11137 1827 aaKnown RBP16.55■□□□□ 0.24
PCDH8-201ENST00000338862 TTC41PQ6P2S7 1318 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 CHMP4AQ9BY43 222 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 IFNKQ9P0W0 207 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-201ENST00000338862 PTPDC1A2A3K4 754 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 CLSTN2Q9H4D0 955 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 GJB4Q9NTQ9 266 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 CDK12Q9NYV4 1490 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-201ENST00000338862 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 VGLL3A8MV65 326 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 ZSCAN20P17040 1043 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-201ENST00000338862 GOLGA8FQ08AF8 430 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 GOLGA8DPQ0D2H9 430 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 NFXL1Q6ZNB6 911 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 RALYLQ86SE5 291 aaKnown RBP16.54■□□□□ 0.24
PCDH8-201ENST00000338862 ZNF396Q96N95 335 aaPredicted RBP16.54■□□□□ 0.24
PCDH8-201ENST00000338862 DNAI1Q9UI46 699 aa16.54■□□□□ 0.24
PCDH8-201ENST00000338862 ZBTB22O15209 634 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 SNW1Q13573 536 aaKnown RBP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 STX1AQ16623 288 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 PGBD1Q96JS3 809 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 NEXMIFQ5QGS0 1516 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 ZC3H13Q5T200 1668 aaKnown RBP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 PES1O00541 588 aaKnown RBP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 NCBP1Q09161 790 aaKnown RBP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 USP28Q96RU2 1077 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 ANO10Q9NW15 660 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 INO80Q9ULG1 1556 aaPredicted RBP16.53■□□□□ 0.24
PCDH8-201ENST00000338862 KIDINS220Q9ULH0 1771 aa16.53■□□□□ 0.24
PCDH8-201ENST00000338862 SASH1O94885 1247 aa16.52■□□□□ 0.24
PCDH8-201ENST00000338862 NECTIN1Q15223 517 aa16.52■□□□□ 0.23
PCDH8-201ENST00000338862 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.23
PCDH8-201ENST00000338862 MROH1Q8NDA8 1641 aa16.52■□□□□ 0.23
PCDH8-201ENST00000338862 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.23
PCDH8-201ENST00000338862 ST7Q9NRC1 585 aa16.52■□□□□ 0.23
PCDH8-201ENST00000338862 KCNA6P17658 529 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 ERCC6LQ2NKX8 1250 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 CRB1P82279 1406 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 TCHHQ07283 1943 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
PCDH8-201ENST00000338862 KRT32Q14532 448 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 UBXN4Q92575 508 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 SALL3Q9BXA9 1300 aa16.51■□□□□ 0.23
PCDH8-201ENST00000338862 CPLX3Q8WVH0 158 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 C8orf76Q96K31 380 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 PHF8Q9UPP1 1060 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
PCDH8-201ENST00000338862 PAXBP1Q9Y5B6 917 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 ALKQ9UM73 1620 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
PCDH8-201ENST00000338862 ATP7BP35670 1465 aa16.5■□□□□ 0.23
PCDH8-201ENST00000338862 POLA2Q14181 598 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 TEX35Q5T0J7 233 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 SSH2Q76I76 1423 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 SLC3A2P08195 630 aaKnown RBP16.49■□□□□ 0.23
PCDH8-201ENST00000338862 ST3GAL1Q11201 340 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 LINS1Q8NG48 757 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 GOLGA8BA8MQT2 603 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
PCDH8-201ENST00000338862 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms