RNA–Protein interactions for RNA: ENST00000302102.9

ATP1A3-201, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene ATP1A3, Length 3,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-201ENST00000302102 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
ATP1A3-201ENST00000302102 TRDNQ13061 729 aa13.36□□□□□ -0.27
ATP1A3-201ENST00000302102 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
ATP1A3-201ENST00000302102 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
ATP1A3-201ENST00000302102 NRBP1Q9UHY1 535 aa13.36□□□□□ -0.27
ATP1A3-201ENST00000302102 MAP3K5Q99683 1374 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 PTPN21Q16825 1174 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 INTS4Q96HW7 963 aaKnown RBP13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 DBNDD2Q9BQY9 259 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 ATP7BP35670 1465 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 TOM1L2Q6ZVM7 507 aa13.35□□□□□ -0.27
ATP1A3-201ENST00000302102 DDIT3P35638 169 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 TTC6Q86TZ1 520 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 RASSF8Q8NHQ8 419 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 TECPR2O15040 1411 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 MARCKSP29966 332 aaPredicted RBP13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 ANKRD1Q15327 319 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 SSH3Q8TE77 659 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 PYCARDQ9ULZ3 195 aa13.34□□□□□ -0.27
ATP1A3-201ENST00000302102 HIP1O00291 1037 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 SLC27A2O14975 620 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 TPM4P67936 248 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 TTC39AQ5SRH9 613 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 USP16Q9Y5T5 823 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 DLC1Q96QB1 1528 aa13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.27
ATP1A3-201ENST00000302102 PTCH1Q13635 1447 aa13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 GCP02774 474 aa13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 SLC4A8Q2Y0W8 1093 aa13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 ZNF589Q86UQ0 364 aaPredicted RBP13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 CD163L1Q9NR16 1453 aa13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 USP6P35125 1406 aa13.33□□□□□ -0.28
ATP1A3-201ENST00000302102 U2AF2P26368 475 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 MAP7D2Q96T17 732 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 MTMR6Q9Y217 621 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 SERPINC1P01008 464 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 CEP126Q9P2H0 1117 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 TAF6LQ9Y6J9 622 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 CPS1P31327 1500 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 A0A1B0GVL5 298 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 RIOK3O14730 519 aaKnown RBP13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 NR1I2O75469 434 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 CCDC57Q2TAC2 916 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 FAM200AQ8TCP9 573 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 NUP133Q8WUM0 1156 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
ATP1A3-201ENST00000302102 DYNC1I1O14576 645 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 MED14O60244 1454 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 TRIM29Q14134 588 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 MICU3Q86XE3 530 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 SLAIN2Q9P270 581 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 CFAP45Q9UL16 551 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 LINS1Q8NG48 757 aa13.31□□□□□ -0.28
ATP1A3-201ENST00000302102 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 AOPEPQ8N6M6 819 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 HELBQ8NG08 1087 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 PI4K2BQ8TCG2 481 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 ZSWIM4Q9H7M6 989 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 GOLGA8BA8MQT2 603 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 LMOD1P29536 600 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 NAA30Q147X3 362 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 VPS53Q5VIR6 699 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 ZNF496Q96IT1 587 aaPredicted RBP13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 PRDM11Q9NQV5 511 aa13.3□□□□□ -0.28
ATP1A3-201ENST00000302102 KIAA0232Q92628 1395 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 NUTM2BA6NNL0 878 aaPredicted RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 NUTM2EB1AL46 878 aaPredicted RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 KLHL10Q6JEL2 608 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 NUTM2AQ8IVF1 878 aaPredicted RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CYP2E1P05181 493 aaPredicted RBP13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CFAP100Q494V2 611 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 OSBPL3Q9H4L5 887 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 ADGRL3Q9HAR2 1447 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
ATP1A3-201ENST00000302102 SKILP12757 684 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms