RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 SYAP1Q96A49 352 aaPredicted RBP15.77■□□□□ 0.12
KCNIP3-201ENST00000295225 NLRP2Q9NX02 1062 aa15.77■□□□□ 0.12
KCNIP3-201ENST00000295225 USP16Q9Y5T5 823 aa15.77■□□□□ 0.12
KCNIP3-201ENST00000295225 GRM8O00222 908 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 PLEKHO1Q53GL0 409 aaPredicted RBP15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 AKAP4Q5JQC9 854 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 CHST3Q7LGC8 479 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 TTC6Q86TZ1 520 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 XAGE3Q8WTP9 111 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 ERCC4Q92889 916 aaPredicted RBP15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 TUBGCP6Q96RT7 1819 aa15.77■□□□□ 0.11
KCNIP3-201ENST00000295225 CCDC171Q6TFL3 1326 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 DMTNQ08495 405 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 CCDC183Q5T5S1 534 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 FTOQ9C0B1 505 aaKnown RBP eCLIP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 SLC27A2O14975 620 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 ZNF500O60304 480 aaPredicted RBP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 NECTIN1Q15223 517 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 DDX46Q7L014 1031 aaKnown RBP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 LUZP1Q86V48 1076 aa15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 CCDC85AQ96PX6 553 aaPredicted RBP15.76■□□□□ 0.11
KCNIP3-201ENST00000295225 KIF20AO95235 890 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 UBE2HP62256 183 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 UBE3BQ7Z3V4 1068 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 KDM4AO75164 1064 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 ZNF330Q9Y3S2 320 aaPredicted RBP15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 GOLGB1Q14789 3259 aaKnown RBP15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 ZKSCAN1P17029 563 aaPredicted RBP15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 GUCY1B3Q02153 619 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 ZSWIM6Q9HCJ5 1215 aa15.74■□□□□ 0.11
KCNIP3-201ENST00000295225 TFCP2Q12800 502 aa15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 PDIA6Q15084 440 aa15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 RAB11FIP4Q86YS3 637 aa15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 PYCARDQ9ULZ3 195 aa15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 KIAA2012Q0VF49 1180 aa15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 ZNF496Q96IT1 587 aaPredicted RBP15.73■□□□□ 0.11
KCNIP3-201ENST00000295225 NBPF11Q86T75 865 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 FAM177A1Q8N128 213 aaPredicted RBP15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 EVI5LQ96CN4 794 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 NRBP1Q9UHY1 535 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 RUFY2Q8WXA3 655 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 DACT1Q9NYF0 836 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 AOX1Q06278 1338 aa15.72■□□□□ 0.11
KCNIP3-201ENST00000295225 NEUROD6Q96NK8 337 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 DBNDD2Q9BQY9 259 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 COL15A1P39059 1388 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 CSB-PGBD3P0DP91 1061 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 LRMPQ12912 555 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 TOB2Q14106 344 aaPredicted RBP15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 VPS53Q5VIR6 699 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 BLOC1S2Q6QNY1 142 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 DBNLQ9UJU6 430 aaKnown RBP15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 LTN1O94822 1766 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 TTC41PQ6P2S7 1318 aa15.71■□□□□ 0.11
KCNIP3-201ENST00000295225 TTC36A6NLP5 189 aa15.71■□□□□ 0.1
KCNIP3-201ENST00000295225 CCT2P78371 535 aaKnown RBP15.71■□□□□ 0.1
KCNIP3-201ENST00000295225 NOLC1Q14978 699 aaKnown RBP eCLIP15.71■□□□□ 0.1
KCNIP3-201ENST00000295225 GPATCH3Q96I76 525 aa15.71■□□□□ 0.1
KCNIP3-201ENST00000295225 TIMM10P62072 90 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 PROSER2Q86WR7 435 aaPredicted RBP15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 MAP4K1Q92918 833 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 KCNF1Q9H3M0 494 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 SLC20A2Q08357 652 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 LINS1Q8NG48 757 aa15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 ZNF594Q96JF6 807 aaPredicted RBP15.7■□□□□ 0.1
KCNIP3-201ENST00000295225 ANKARQ7Z5J8 1434 aa15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 MARF1Q9Y4F3 1742 aaKnown RBP15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 HS1BP3Q53T59 392 aa15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 NCOA5Q9HCD5 579 aaKnown RBP15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 LRRC37A3O60309 1634 aa15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 NEURL1BA8MQ27 555 aa15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 NR1I2O75469 434 aa15.69■□□□□ 0.1
KCNIP3-201ENST00000295225 PTGS1P23219 599 aa15.68■□□□□ 0.1
KCNIP3-201ENST00000295225 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
KCNIP3-201ENST00000295225 GPHNQ9NQX3 736 aaPredicted RBP15.68■□□□□ 0.1
KCNIP3-201ENST00000295225 SEMA3FQ13275 785 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 GCKRQ14397 625 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 Q6ZUG5 572 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 KRT28Q7Z3Y7 464 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 BICD2Q8TD16 824 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 BRF1Q92994 677 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 FUCA2Q9BTY2 467 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 YY1AP1Q9H869 796 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 ANO6Q4KMQ2 910 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 DRC7Q8IY82 874 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 KCNH5Q8NCM2 988 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 DDX21Q9NR30 783 aaKnown RBP eCLIP15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 SNRKQ9NRH2 765 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 A0A087WZG4 1122 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 SPATA32Q96LK8 384 aa15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 GEMIN8Q9NWZ8 242 aaKnown RBP15.67■□□□□ 0.1
KCNIP3-201ENST00000295225 TAF5LO75529 589 aa15.66■□□□□ 0.1
KCNIP3-201ENST00000295225 MTX1Q13505 466 aa15.66■□□□□ 0.1
KCNIP3-201ENST00000295225 OTUD7BQ6GQQ9 843 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms