RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 KIAA0232Q92628 1395 aa14.61□□□□□ -0.07
SLC6A1-201ENST00000287766 FAM135BQ49AJ0 1406 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 PTH1RQ03431 593 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 ABCF2Q9UG63 623 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 CTNNA3Q9UI47 895 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 MLH3Q9UHC1 1453 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 CCDC171Q6TFL3 1326 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 MCM5P33992 734 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 ZNF445P59923 1031 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 NOLC1Q14978 699 aaKnown RBP eCLIP14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 LUZP1Q86V48 1076 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 CCDC47Q96A33 483 aaKnown RBP14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 NSFL1CQ9UNZ2 370 aaKnown RBP14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 ABCC3O15438 1527 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 BRD1O95696 1058 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 RUFY3Q7L099 469 aa14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 CCAR1Q8IX12 1150 aaKnown RBP14.6□□□□□ -0.07
SLC6A1-201ENST00000287766 TTC41PQ6P2S7 1318 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 PRAMEF22A3QJZ6 481 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 TDO2P48775 406 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 FILIP1LQ4L180 1135 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 PRIMPOLQ96LW4 560 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 NOL10Q9BSC4 688 aaKnown RBP14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 RAD50Q92878 1312 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 SFPQP23246 707 aaKnown RBP eCLIP14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 HSPA4P34932 840 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 IFIT5Q13325 482 aaKnown RBP14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 SART3Q15020 963 aaKnown RBP14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 USP16Q9Y5T5 823 aa14.59□□□□□ -0.07
SLC6A1-201ENST00000287766 APOBRQ0VD83 1088 aa14.58□□□□□ -0.07
SLC6A1-201ENST00000287766 AIDAQ96BJ3 306 aa14.58□□□□□ -0.07
SLC6A1-201ENST00000287766 DBNDD2Q9BQY9 259 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 PRM3Q9NNZ6 103 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 DDX19AQ9NUU7 478 aaKnown RBP14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 CWC25Q9NXE8 425 aaPredicted RBP14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 CCDC69A6NI79 296 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 HSP90AA4PQ58FG1 418 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 SSH3Q8TE77 659 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 VGLL3A8MV65 326 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 LMAN1P49257 510 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 PPFIBP1Q86W92 1011 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 MICU3Q86XE3 530 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 SMARCE1Q969G3 411 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 KIF2CQ99661 725 aa14.58□□□□□ -0.08
SLC6A1-201ENST00000287766 LDHAL6AQ6ZMR3 332 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 TMOD3Q9NYL9 352 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 ORC3Q9UBD5 711 aaPredicted RBP14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 ZNF213O14771 459 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 CFAP100Q494V2 611 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 TSC1Q92574 1164 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 DDX21Q9NR30 783 aaKnown RBP eCLIP14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 V9GYY5 206 aaPredicted RBP14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 NEO1Q92859 1461 aa14.57□□□□□ -0.08
SLC6A1-201ENST00000287766 MINDY4BA8MYZ0 360 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 TYRO3Q06418 890 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 MCMDC2Q4G0Z9 681 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 ZBTB9Q96C00 473 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 LRP2BPQ9P2M1 347 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 PTGS1P23219 599 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 ADCK5Q3MIX3 580 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 TRMT112Q9UI30 125 aaKnown RBP14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 GLI2P10070 1586 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 SLC27A2O14975 620 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 KRT222Q8N1A0 295 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 JMYQ8N9B5 988 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 EAF2Q96CJ1 260 aaPredicted RBP14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 TMX1Q9H3N1 280 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 NCOA5Q9HCD5 579 aaKnown RBP14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 HMG20BQ9P0W2 317 aa14.56□□□□□ -0.08
SLC6A1-201ENST00000287766 UVSSAQ2YD98 709 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 ZNF790Q6PG37 636 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 TRIM22Q8IYM9 498 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 FAM200AQ8TCP9 573 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 ZNF594Q96JF6 807 aaPredicted RBP14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 NOL7Q9UMY1 257 aaKnown RBP14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 AATKQ6ZMQ8 1374 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 KLF18A0A0U1RQI7 1052 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 JAK2O60674 1132 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 CDC37L1Q7L3B6 337 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 ANO10Q9NW15 660 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 TULP4Q9NRJ4 1543 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 ME3Q16798 604 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 ODF2Q5BJF6 829 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 IBTKQ9P2D0 1353 aaPredicted RBP14.55□□□□□ -0.08
SLC6A1-201ENST00000287766 RXRAP19793 462 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 RAI14Q9P0K7 980 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 IQSEC3Q9UPP2 1182 aaPredicted RBP14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 GOLGA6L10A6NI86 522 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 ARHGAP29Q52LW3 1261 aa14.54□□□□□ -0.08
SLC6A1-201ENST00000287766 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms