RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 KCNF1Q9H3M0 494 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 TMX1Q9H3N1 280 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 MAP3K5Q99683 1374 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 LMTK2Q8IWU2 1503 aa15.71■□□□□ 0.1
SCAF4-201ENST00000286835 ABCA9Q8IUA7 1624 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 GCP02774 474 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 POLR3DP05423 398 aaPredicted RBP15.7■□□□□ 0.1
SCAF4-201ENST00000286835 TTC14Q96N46 770 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 BICC1Q9H694 974 aaKnown RBP15.7■□□□□ 0.1
SCAF4-201ENST00000286835 ARHGEF28Q8N1W1 1705 aaKnown RBP15.7■□□□□ 0.1
SCAF4-201ENST00000286835 AOX1Q06278 1338 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 SLC39A6Q13433 755 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 ZSCAN25Q6NSZ9 544 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 AOPEPQ8N6M6 819 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 PDILTQ8N807 584 aa15.7■□□□□ 0.1
SCAF4-201ENST00000286835 AP5Z1O43299 807 aa15.69■□□□□ 0.1
SCAF4-201ENST00000286835 KIF18AQ8NI77 898 aa15.69■□□□□ 0.1
SCAF4-201ENST00000286835 ZSWIM6Q9HCJ5 1215 aa15.69■□□□□ 0.1
SCAF4-201ENST00000286835 ATP5J2-PTCD1G3V325 749 aa15.69■□□□□ 0.1
SCAF4-201ENST00000286835 ZNF396Q96N95 335 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-201ENST00000286835 TLR7Q9NYK1 1049 aaKnown RBP15.69■□□□□ 0.1
SCAF4-201ENST00000286835 EAF2Q96CJ1 260 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-201ENST00000286835 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-201ENST00000286835 CCDC69A6NI79 296 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 SMTNL1A8MU46 457 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 ARID5BQ14865 1188 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 ALKQ9UM73 1620 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 GRM8O00222 908 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 KRT32Q14532 448 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 FTOQ9C0B1 505 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCAF4-201ENST00000286835 TOMM22Q9NS69 142 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 USP32Q8NFA0 1604 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 APPP05067 770 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 DMTNQ08495 405 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 CPS1P31327 1500 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 RPS6KB1P23443 525 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 HSP90AA4PQ58FG1 418 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 BEND3Q5T5X7 828 aa15.68■□□□□ 0.1
SCAF4-201ENST00000286835 NCOA5Q9HCD5 579 aaKnown RBP15.68■□□□□ 0.1
SCAF4-201ENST00000286835 FKBP4Q02790 459 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCAF4-201ENST00000286835 STX1AQ16623 288 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 TMEM87AQ8NBN3 555 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 CACTINQ8WUQ7 758 aaKnown RBP15.67■□□□□ 0.1
SCAF4-201ENST00000286835 ANO10Q9NW15 660 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 PAXBP1Q9Y5B6 917 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 HAND2P61296 217 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 APOBRQ0VD83 1088 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 GTPBP4Q9BZE4 634 aaKnown RBP15.67■□□□□ 0.1
SCAF4-201ENST00000286835 CLSTN2Q9H4D0 955 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 ATP2B1P20020 1258 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 PROSER3Q2NL68 480 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 UBE3BQ7Z3V4 1068 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 SUCLG2Q96I99 432 aa15.67■□□□□ 0.1
SCAF4-201ENST00000286835 SEC62Q99442 399 aaKnown RBP15.67■□□□□ 0.1
SCAF4-201ENST00000286835 GOLIM4O00461 696 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 SERPINC1P01008 464 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 PRAMEF22A3QJZ6 481 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 SFPQP23246 707 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCAF4-201ENST00000286835 KSR2Q6VAB6 950 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
SCAF4-201ENST00000286835 EIF4A1P60842 406 aaKnown RBP15.66■□□□□ 0.1
SCAF4-201ENST00000286835 POLR3GO15318 223 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-201ENST00000286835 OTUD7BQ6GQQ9 843 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 ZNF589Q86UQ0 364 aaPredicted RBP15.65■□□□□ 0.1
SCAF4-201ENST00000286835 ELF2Q15723 593 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 RIMBP3CA6NJZ7 1639 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 RIMBP3BA6NNM3 1639 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 RIMBP3Q9UFD9 1639 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 CRB1P82279 1406 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 SNW1Q13573 536 aaKnown RBP15.65■□□□□ 0.1
SCAF4-201ENST00000286835 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
SCAF4-201ENST00000286835 DNAJC5Q9H3Z4 198 aa15.65■□□□□ 0.1
SCAF4-201ENST00000286835 AMOTQ4VCS5 1084 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 ZNF215Q9UL58 517 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-201ENST00000286835 SALL3Q9BXA9 1300 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 URI1O94763 535 aaPredicted RBP15.64■□□□□ 0.09
SCAF4-201ENST00000286835 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 TM6SF1Q9BZW5 370 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 SPTLC3Q9NUV7 552 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 OGFRQ9NZT2 677 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 TAF6LQ9Y6J9 622 aa15.64■□□□□ 0.09
SCAF4-201ENST00000286835 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 PRDM4Q9UKN5 801 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 PIK3C2BO00750 1634 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 LMOD1P29536 600 aaPredicted RBP15.63■□□□□ 0.09
SCAF4-201ENST00000286835 CFAP100Q494V2 611 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 POLA2Q14181 598 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 TTLL5Q6EMB2 1281 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 COPS6Q7L5N1 327 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 NEURL4Q96JN8 1562 aa15.63■□□□□ 0.09
SCAF4-201ENST00000286835 PTPDC1A2A3K4 754 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 ZSCAN20P17040 1043 aaPredicted RBP15.62■□□□□ 0.09
SCAF4-201ENST00000286835 NECTIN1Q15223 517 aa15.62■□□□□ 0.09
SCAF4-201ENST00000286835 SYT10Q6XYQ8 523 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms