RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
COL8A1-202ENST00000273342 SLFNL1Q499Z3 407 aa15.2■□□□□ 0.02
COL8A1-202ENST00000273342 FBXO38Q6PIJ6 1188 aa15.2■□□□□ 0.02
COL8A1-202ENST00000273342 BBXQ8WY36 941 aaPredicted RBP15.2■□□□□ 0.02
COL8A1-202ENST00000273342 PLEKHG3A1L390 1219 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 EIF4A1P60842 406 aaKnown RBP15.19■□□□□ 0.02
COL8A1-202ENST00000273342 CCAR1Q8IX12 1150 aaKnown RBP15.19■□□□□ 0.02
COL8A1-202ENST00000273342 ELP1O95163 1332 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 SBNO1A3KN83 1393 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 TEFQ10587 303 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 RNF20Q5VTR2 975 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 Q6ZUG5 572 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 TUBGCP6Q96RT7 1819 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 VGLL3A8MV65 326 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 ISM2Q6H9L7 571 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 LRRN4CLQ8ND94 238 aa15.19■□□□□ 0.02
COL8A1-202ENST00000273342 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
COL8A1-202ENST00000273342 BICC1Q9H694 974 aaKnown RBP15.19■□□□□ 0.02
COL8A1-202ENST00000273342 RIMBP3CA6NJZ7 1639 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 RIMBP3BA6NNM3 1639 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 RIMBP3Q9UFD9 1639 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 BTBD11A6QL63 1104 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 CHST3Q7LGC8 479 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 SUCLG2Q96I99 432 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 GOLPH3LQ9H4A5 285 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 BIN1O00499 593 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 PTPN21Q16825 1174 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
COL8A1-202ENST00000273342 C3P01024 1663 aa15.18■□□□□ 0.02
COL8A1-202ENST00000273342 ME1P48163 572 aa15.17■□□□□ 0.02
COL8A1-202ENST00000273342 IQCB1Q15051 598 aa15.17■□□□□ 0.02
COL8A1-202ENST00000273342 KDRP35968 1356 aa15.17■□□□□ 0.02
COL8A1-202ENST00000273342 ERCC6LQ2NKX8 1250 aa15.17■□□□□ 0.02
COL8A1-202ENST00000273342 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
COL8A1-202ENST00000273342 LRRC59Q96AG4 307 aaKnown RBP15.17■□□□□ 0.02
COL8A1-202ENST00000273342 ADCY9O60503 1353 aa15.16■□□□□ 0.02
COL8A1-202ENST00000273342 RESTQ13127 1097 aa15.16■□□□□ 0.02
COL8A1-202ENST00000273342 ANKRD1Q15327 319 aa15.16■□□□□ 0.02
COL8A1-202ENST00000273342 KRT222Q8N1A0 295 aa15.16■□□□□ 0.02
COL8A1-202ENST00000273342 EID1Q9Y6B2 187 aa15.16■□□□□ 0.02
COL8A1-202ENST00000273342 SETD1BQ9UPS6 1966 aaKnown RBP15.16■□□□□ 0.02
COL8A1-202ENST00000273342 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
COL8A1-202ENST00000273342 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.16■□□□□ 0.02
COL8A1-202ENST00000273342 NRKQ7Z2Y5 1582 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 USP31Q70CQ4 1352 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 SMC2O95347 1197 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 TERF2Q15554 542 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 NEK1Q96PY6 1258 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 MON2Q7Z3U7 1717 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 XRN1Q8IZH2 1706 aaKnown RBP15.15■□□□□ 0.02
COL8A1-202ENST00000273342 KINO60870 393 aaKnown RBP15.15■□□□□ 0.02
COL8A1-202ENST00000273342 RBM6P78332 1123 aaKnown RBP15.15■□□□□ 0.02
COL8A1-202ENST00000273342 OTUD7BQ6GQQ9 843 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 SYT10Q6XYQ8 523 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 CCDC73Q6ZRK6 1079 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 ZNF397Q8NF99 534 aaPredicted RBP15.15■□□□□ 0.02
COL8A1-202ENST00000273342 SDF4Q9BRK5 362 aa15.15■□□□□ 0.02
COL8A1-202ENST00000273342 MORC2Q9Y6X9 1032 aaPredicted RBP15.15■□□□□ 0.02
COL8A1-202ENST00000273342 MYL6BP14649 208 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 APOBRQ0VD83 1088 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 SCRN1Q12765 414 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 NBPF6Q5VWK0 638 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 KCNB2Q92953 911 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 NBPF4Q96M43 638 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 A0A0G2JLW4 131 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 A0A1B0GVL5 298 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 CCZ1BP86790 482 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 CCZ1P86791 482 aaPredicted RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 RBM43Q6ZSC3 357 aaKnown RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 DDX46Q7L014 1031 aaKnown RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 FSIP1Q8NA03 581 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 TAF5LO75529 589 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 STX1AQ16623 288 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 CCAR2Q8N163 923 aaKnown RBP15.14■□□□□ 0.01
COL8A1-202ENST00000273342 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 TMX1Q9H3N1 280 aa15.14■□□□□ 0.01
COL8A1-202ENST00000273342 USP42Q9H9J4 1324 aaKnown RBP15.13■□□□□ 0.01
COL8A1-202ENST00000273342 DHX40Q8IX18 779 aaKnown RBP15.13■□□□□ 0.01
COL8A1-202ENST00000273342 CFAP45Q9UL16 551 aa15.13■□□□□ 0.01
COL8A1-202ENST00000273342 ITSN1Q15811 1721 aa15.13■□□□□ 0.01
COL8A1-202ENST00000273342 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
COL8A1-202ENST00000273342 ERC1Q8IUD2 1116 aa15.13■□□□□ 0.01
COL8A1-202ENST00000273342 CYP21A2P08686 494 aa15.12■□□□□ 0.01
COL8A1-202ENST00000273342 GABPB1Q06547 395 aaPredicted RBP15.12■□□□□ 0.01
COL8A1-202ENST00000273342 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
COL8A1-202ENST00000273342 ZNF446Q9NWS9 450 aa15.12■□□□□ 0.01
COL8A1-202ENST00000273342 DBF4Q9UBU7 674 aaPredicted RBP15.12■□□□□ 0.01
COL8A1-202ENST00000273342 NPHP4O75161 1426 aaPredicted RBP15.12■□□□□ 0.01
COL8A1-202ENST00000273342 SLU7O95391 586 aaKnown RBP15.12■□□□□ 0.01
COL8A1-202ENST00000273342 NYAP1Q6ZVC0 841 aa15.12■□□□□ 0.01
COL8A1-202ENST00000273342 GRM8O00222 908 aa15.11■□□□□ 0.01
COL8A1-202ENST00000273342 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
COL8A1-202ENST00000273342 SNW1Q13573 536 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms