RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC5A1P13866 664 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 KAZALD1Q96I82 304 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 TFCP2L1Q9NZI6 479 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 ITPK1Q13572 414 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 KRT27Q7Z3Y8 459 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 ANKRD18AQ8IVF6 992 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 LARP6Q9BRS8 491 aaKnown RBP11.18□□□□□ -0.62
SSR3-201ENST00000265044 ERVV-1B6SEH8 477 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 CASTP20810 708 aaKnown RBP11.18□□□□□ -0.62
SSR3-201ENST00000265044 NMIQ13287 307 aaPredicted RBP11.18□□□□□ -0.62
SSR3-201ENST00000265044 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
SSR3-201ENST00000265044 ISCA1Q9BUE6 129 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 DBNLQ9UJU6 430 aaKnown RBP11.18□□□□□ -0.62
SSR3-201ENST00000265044 PXDNLA1KZ92 1463 aa11.18□□□□□ -0.62
SSR3-201ENST00000265044 TAF5LO75529 589 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
SSR3-201ENST00000265044 AOX1Q06278 1338 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 FAM196AQ6ZSG2 479 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
SSR3-201ENST00000265044 LRP2BPQ9P2M1 347 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 PSMA5P28066 241 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 PAG1Q9NWQ8 432 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 CYP46A1Q9Y6A2 500 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 XAGE2Q96GT9 111 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 FAM227BQ96M60 508 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
SSR3-201ENST00000265044 SRP68Q9UHB9 627 aaKnown RBP11.17□□□□□ -0.62
SSR3-201ENST00000265044 BCL9O00512 1426 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
SSR3-201ENST00000265044 APBA3O96018 575 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
SSR3-201ENST00000265044 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 NYXQ9GZU5 481 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 MCM2P49736 904 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 TRDNQ13061 729 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 CAVIN4Q5BKX8 364 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 TTLL11Q8NHH1 800 aa11.16□□□□□ -0.62
SSR3-201ENST00000265044 FOXO4P98177 505 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
SSR3-201ENST00000265044 BLOC1S2Q6QNY1 142 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 FNBP4Q8N3X1 1017 aaPredicted RBP11.15□□□□□ -0.62
SSR3-201ENST00000265044 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 SGSM2O43147 1006 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 STK11IPQ8N1F8 1099 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 RPGRQ92834 1020 aaKnown RBP11.15□□□□□ -0.62
SSR3-201ENST00000265044 SEC31BQ9NQW1 1179 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 RAI14Q9P0K7 980 aa11.15□□□□□ -0.62
SSR3-201ENST00000265044 TRIM28Q13263 835 aaKnown RBP11.14□□□□□ -0.63
SSR3-201ENST00000265044 ZSCAN25Q6NSZ9 544 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 RALYLQ86SE5 291 aaKnown RBP11.14□□□□□ -0.63
SSR3-201ENST00000265044 TNS2Q63HR2 1409 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 PLEKHG2Q9H7P9 1386 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 ATP5JP18859 108 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 SMC3Q9UQE7 1217 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 RBM8AQ9Y5S9 174 aaKnown RBP11.14□□□□□ -0.63
SSR3-201ENST00000265044 RABL6Q3YEC7 729 aaPredicted RBP11.14□□□□□ -0.63
SSR3-201ENST00000265044 PTF1AQ7RTS3 328 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 UTYO14607 1347 aa11.14□□□□□ -0.63
SSR3-201ENST00000265044 STK3Q13188 491 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 ZNF772Q68DY9 489 aaPredicted RBP11.13□□□□□ -0.63
SSR3-201ENST00000265044 AIDAQ96BJ3 306 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 PHLPP1O60346 1717 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 MCMDC2Q4G0Z9 681 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 CCDC129Q6ZRS4 1044 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 CNBD1Q8NA66 436 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 TCEANC2Q96MN5 208 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 COL15A1P39059 1388 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
SSR3-201ENST00000265044 ADORA1P30542 326 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 INTS5Q6P9B9 1019 aaKnown RBP11.13□□□□□ -0.63
SSR3-201ENST00000265044 LINC00116Q8NCU8 138 aa11.13□□□□□ -0.63
SSR3-201ENST00000265044 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 SLC9C2Q5TAH2 1124 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 RXRBP28702 533 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 NUCB2P80303 420 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 ERFEQ4G0M1 354 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 LRP10Q7Z4F1 713 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 MARF1Q9Y4F3 1742 aaKnown RBP11.12□□□□□ -0.63
SSR3-201ENST00000265044 SNAP23O00161 211 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
SSR3-201ENST00000265044 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
SSR3-201ENST00000265044 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
SSR3-201ENST00000265044 CPA1P15085 419 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 HAND2P61296 217 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 ST5P78524 1137 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 VPS37CA5D8V6 355 aaPredicted RBP11.11□□□□□ -0.63
SSR3-201ENST00000265044 ZAP70P43403 619 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 RRP12Q5JTH9 1297 aaKnown RBP11.11□□□□□ -0.63
SSR3-201ENST00000265044 FAM184AQ8NB25 1140 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
SSR3-201ENST00000265044 CACNA1FO60840 1977 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 CCDC171Q6TFL3 1326 aa11.11□□□□□ -0.63
SSR3-201ENST00000265044 A0A0D9SFI3 127 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms