RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 MAP3K11Q16584 847 aa19.64■□□□□ 0.73
ZNF541-201ENST00000263351 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
ZNF541-201ENST00000263351 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
ZNF541-201ENST00000263351 XAGE3Q8WTP9 111 aa19.64■□□□□ 0.73
ZNF541-201ENST00000263351 ZSCAN31Q96LW9 406 aaPredicted RBP19.64■□□□□ 0.73
ZNF541-201ENST00000263351 ZC3H6P61129 1189 aaKnown RBP19.64■□□□□ 0.73
ZNF541-201ENST00000263351 LEO1Q8WVC0 666 aaPredicted RBP19.64■□□□□ 0.73
ZNF541-201ENST00000263351 TNMDQ9H2S6 317 aa19.64■□□□□ 0.73
ZNF541-201ENST00000263351 SPTLC3Q9NUV7 552 aa19.64■□□□□ 0.73
ZNF541-201ENST00000263351 GCP02774 474 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 TFCP2Q12800 502 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 CHST3Q7LGC8 479 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 NFAT5O94916 1531 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 TAF5LO75529 589 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 LETM1O95202 739 aaPredicted RBP19.63■□□□□ 0.73
ZNF541-201ENST00000263351 COPS6Q7L5N1 327 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 LINS1Q8NG48 757 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 BRF1Q92994 677 aa19.63■□□□□ 0.73
ZNF541-201ENST00000263351 C16orf45Q96MC5 204 aaPredicted RBP19.63■□□□□ 0.73
ZNF541-201ENST00000263351 ALDH1L1O75891 902 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 HOXB7P09629 217 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 GUCY1B3Q02153 619 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 THEMISQ8N1K5 641 aaPredicted RBP19.62■□□□□ 0.73
ZNF541-201ENST00000263351 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 FAM200AQ8TCP9 573 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 DDX17Q92841 729 aaKnown RBP19.62■□□□□ 0.73
ZNF541-201ENST00000263351 DBNDD2Q9BQY9 259 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 PRDM4Q9UKN5 801 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 ZHX1Q9UKY1 873 aaPredicted RBP19.62■□□□□ 0.73
ZNF541-201ENST00000263351 TAOK2Q9UL54 1235 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 ARHGAP23Q9P227 1491 aa19.62■□□□□ 0.73
ZNF541-201ENST00000263351 HSP90B1P14625 803 aaKnown RBP19.61■□□□□ 0.73
ZNF541-201ENST00000263351 CCDC144BQ3MJ40 725 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 Q6ZUG5 572 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 STOX1Q6ZVD7 989 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 CCDC144CPQ8IYA2 1237 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 MED23Q9ULK4 1368 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 IGSF3O75054 1194 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 NFATC2IPQ8NCF5 419 aa19.61■□□□□ 0.73
ZNF541-201ENST00000263351 GOLGA6L4A6NEF3 574 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 NEURL1BA8MQ27 555 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 PPP4R3BQ5MIZ7 849 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 NCOA5Q9HCD5 579 aaKnown RBP19.6■□□□□ 0.73
ZNF541-201ENST00000263351 CYP21A2P08686 494 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
ZNF541-201ENST00000263351 NAP1L2Q9ULW6 460 aaPredicted RBP19.6■□□□□ 0.73
ZNF541-201ENST00000263351 SLIT1O75093 1534 aa19.59■□□□□ 0.73
ZNF541-201ENST00000263351 CCT2P78371 535 aaKnown RBP19.59■□□□□ 0.73
ZNF541-201ENST00000263351 TRIM5Q9C035 493 aa19.59■□□□□ 0.73
ZNF541-201ENST00000263351 KIF3AQ9Y496 699 aa19.59■□□□□ 0.73
ZNF541-201ENST00000263351 ZNF609O15014 1411 aa19.59■□□□□ 0.73
ZNF541-201ENST00000263351 C11orf57Q6ZUT1 292 aaPredicted RBP19.58■□□□□ 0.73
ZNF541-201ENST00000263351 DDX21Q9NR30 783 aaKnown RBP eCLIP19.58■□□□□ 0.73
ZNF541-201ENST00000263351 ANKARQ7Z5J8 1434 aa19.58■□□□□ 0.73
ZNF541-201ENST00000263351 SCRN1Q12765 414 aa19.58■□□□□ 0.72
ZNF541-201ENST00000263351 GCKRQ14397 625 aa19.58■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
ZNF541-201ENST00000263351 U2AF2P26368 475 aaKnown RBP eCLIP19.57■□□□□ 0.72
ZNF541-201ENST00000263351 ARHGEF25Q86VW2 580 aa19.57■□□□□ 0.72
ZNF541-201ENST00000263351 RAB11FIP4Q86YS3 637 aa19.57■□□□□ 0.72
ZNF541-201ENST00000263351 GPHNQ9NQX3 736 aaPredicted RBP19.57■□□□□ 0.72
ZNF541-201ENST00000263351 PSMA5P28066 241 aa19.57■□□□□ 0.72
ZNF541-201ENST00000263351 HMGN5P82970 282 aaKnown RBP19.57■□□□□ 0.72
ZNF541-201ENST00000263351 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
ZNF541-201ENST00000263351 MAP7D2Q96T17 732 aa19.57■□□□□ 0.72
ZNF541-201ENST00000263351 CCDC94Q9BW85 323 aaPredicted RBP19.57■□□□□ 0.72
ZNF541-201ENST00000263351 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
ZNF541-201ENST00000263351 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 USP27XA6NNY8 438 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 APOBRQ0VD83 1088 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 RESTQ13127 1097 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 CACTINQ8WUQ7 758 aaKnown RBP19.56■□□□□ 0.72
ZNF541-201ENST00000263351 GTF3C6Q969F1 213 aa19.56■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF165P49910 485 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 TNNI3KQ59H18 835 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 OTUD7BQ6GQQ9 843 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 NEK1Q96PY6 1258 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 FPGT-TNNI3KV9GXZ4 949 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
ZNF541-201ENST00000263351 ZNF75DP51815 510 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 H3BQV1 296 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 CTDNEP1O95476 244 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 RFX5P48382 616 aaPredicted RBP19.54■□□□□ 0.72
ZNF541-201ENST00000263351 TIMM10P62072 90 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 HSP90AB3PQ58FF7 597 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 IFFO2Q5TF58 517 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 RNF20Q5VTR2 975 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
ZNF541-201ENST00000263351 GJB4Q9NTQ9 266 aa19.54■□□□□ 0.72
ZNF541-201ENST00000263351 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.72
ZNF541-201ENST00000263351 FGD1P98174 961 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 CABLES1Q8TDN4 633 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 NLRP2Q9NX02 1062 aa19.53■□□□□ 0.72
ZNF541-201ENST00000263351 UTYO14607 1347 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms