RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 CEP135Q66GS9 1140 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 LEKR1Q6ZMV7 388 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 AK7Q96M32 723 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 ME1P48163 572 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 RUFY3Q7L099 469 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 PAXBP1Q9Y5B6 917 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 IGSF1Q8N6C5 1336 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 MYO3AQ8NEV4 1616 aa13.52□□□□□ -0.25
SOX9-201ENST00000245479 CCDC24Q8N4L8 307 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 CNNM1Q9NRU3 951 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 CREB3L3Q68CJ9 461 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 SNAP23O00161 211 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 NFXL1Q6ZNB6 911 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 ZNF589Q86UQ0 364 aaPredicted RBP13.51□□□□□ -0.25
SOX9-201ENST00000245479 SYNE4Q8N205 404 aa13.51□□□□□ -0.25
SOX9-201ENST00000245479 ME3Q16798 604 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 ZSCAN22P10073 491 aaPredicted RBP13.5□□□□□ -0.25
SOX9-201ENST00000245479 ZNF165P49910 485 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 CCDC57Q2TAC2 916 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 FTOQ9C0B1 505 aaKnown RBP eCLIP13.5□□□□□ -0.252e-6■■■■□ 25.2
SOX9-201ENST00000245479 TTLL5Q6EMB2 1281 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 PI16Q6UXB8 463 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 HYPKQ9NX55 129 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 JAG2Q9Y219 1238 aa13.5□□□□□ -0.25
SOX9-201ENST00000245479 IFIT1P09914 478 aaKnown RBP13.49□□□□□ -0.25
SOX9-201ENST00000245479 KCNQ4P56696 695 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 CDC37L1Q7L3B6 337 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 LINS1Q8NG48 757 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 DIP2CQ9Y2E4 1556 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
SOX9-201ENST00000245479 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 Q6ZUG5 572 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 PDILTQ8N807 584 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
SOX9-201ENST00000245479 IBTKQ9P2D0 1353 aaPredicted RBP13.49□□□□□ -0.25
SOX9-201ENST00000245479 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
SOX9-201ENST00000245479 LUZP1Q86V48 1076 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 EVI5LQ96CN4 794 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 CEP126Q9P2H0 1117 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 PSMA5P28066 241 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 ERC1Q8IUD2 1116 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 IFNL2Q8IZJ0 200 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 FAM200AQ8TCP9 573 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 LAMC1P11047 1609 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
SOX9-201ENST00000245479 TPCN1Q9ULQ1 816 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 GOLGB1Q14789 3259 aaKnown RBP13.48□□□□□ -0.25
SOX9-201ENST00000245479 AATKQ6ZMQ8 1374 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
SOX9-201ENST00000245479 SMTNL1A8MU46 457 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 SASH1O94885 1247 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
SOX9-201ENST00000245479 RALYLQ86SE5 291 aaKnown RBP13.47□□□□□ -0.25
SOX9-201ENST00000245479 CPSF1Q10570 1443 aaKnown RBP13.47□□□□□ -0.25
SOX9-201ENST00000245479 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 F13A1P00488 732 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
SOX9-201ENST00000245479 PTPN21Q16825 1174 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 LRRC24Q50LG9 513 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 TRIM34Q9BYJ4 488 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 ABCF2Q9UG63 623 aa13.47□□□□□ -0.25
SOX9-201ENST00000245479 KIF2AO00139 706 aaPredicted RBP13.46□□□□□ -0.25
SOX9-201ENST00000245479 URI1O94763 535 aaPredicted RBP13.46□□□□□ -0.25
SOX9-201ENST00000245479 VPS53Q5VIR6 699 aa13.46□□□□□ -0.25
SOX9-201ENST00000245479 ZFP91Q96JP5 570 aaPredicted RBP13.46□□□□□ -0.25
SOX9-201ENST00000245479 TMX1Q9H3N1 280 aa13.46□□□□□ -0.25
SOX9-201ENST00000245479 SNRPA1P09661 255 aaKnown RBP13.46□□□□□ -0.25
SOX9-201ENST00000245479 HSPA4P34932 840 aa13.46□□□□□ -0.25
SOX9-201ENST00000245479 PI4K2BQ8TCG2 481 aa13.46□□□□□ -0.25
SOX9-201ENST00000245479 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
SOX9-201ENST00000245479 GABPB1Q06547 395 aaPredicted RBP13.46□□□□□ -0.26
SOX9-201ENST00000245479 METTL24Q5JXM2 366 aa13.46□□□□□ -0.26
SOX9-201ENST00000245479 CEP57L1Q8IYX8 460 aa13.46□□□□□ -0.26
SOX9-201ENST00000245479 DDX21Q9NR30 783 aaKnown RBP eCLIP13.46□□□□□ -0.26
SOX9-201ENST00000245479 KIAA0232Q92628 1395 aa13.46□□□□□ -0.26
SOX9-201ENST00000245479 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 PIP4K2BP78356 416 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
SOX9-201ENST00000245479 ZNF397Q8NF99 534 aaPredicted RBP13.45□□□□□ -0.26
SOX9-201ENST00000245479 ZSCAN31Q96LW9 406 aaPredicted RBP13.45□□□□□ -0.26
SOX9-201ENST00000245479 BRD1O95696 1058 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 ANO6Q4KMQ2 910 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 NEK1Q96PY6 1258 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 SCAND2PQ9GZW5 306 aaPredicted RBP13.45□□□□□ -0.26
SOX9-201ENST00000245479 CCDC171Q6TFL3 1326 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 SLC27A2O14975 620 aa13.45□□□□□ -0.26
SOX9-201ENST00000245479 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
SOX9-201ENST00000245479 GCKRQ14397 625 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms