RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 CCDC73Q6ZRK6 1079 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 NFATC2IPQ8NCF5 419 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 LEO1Q8WVC0 666 aaPredicted RBP13.19□□□□□ -0.3
NEFM-201ENST00000221166 ORAI2Q96SN7 254 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 CHST3Q7LGC8 479 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 PDCL2Q8N4E4 241 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 DDX21Q9NR30 783 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEFM-201ENST00000221166 CLIP2Q9UDT6 1046 aa13.19□□□□□ -0.3
NEFM-201ENST00000221166 A0A087WZG4 1122 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 RIOK3O14730 519 aaKnown RBP13.18□□□□□ -0.3
NEFM-201ENST00000221166 NR1I2O75469 434 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 ME1P48163 572 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 FMNL2Q96PY5 1086 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
NEFM-201ENST00000221166 NRKQ7Z2Y5 1582 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 C3P01024 1663 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 PEAK1Q9H792 1746 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 AGLP35573 1532 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 KRT32Q14532 448 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
NEFM-201ENST00000221166 A0A087WWV3 80 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 GOLIM4O00461 696 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 ST3GAL1Q11201 340 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
NEFM-201ENST00000221166 TRHP20396 242 aaPredicted RBP13.17□□□□□ -0.3
NEFM-201ENST00000221166 NPHP1O15259 732 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 KINO60870 393 aaKnown RBP13.17□□□□□ -0.3
NEFM-201ENST00000221166 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 ERCC4Q92889 916 aaPredicted RBP13.17□□□□□ -0.3
NEFM-201ENST00000221166 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
NEFM-201ENST00000221166 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 NPHP3Q7Z494 1330 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 MON2Q7Z3U7 1717 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 TNNT1P13805 278 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
NEFM-201ENST00000221166 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 SLFNL1Q499Z3 407 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 KIAA1524Q8TCG1 905 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 MTX1Q13505 466 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 WASHC4Q2M389 1173 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 CCAR1Q8IX12 1150 aaKnown RBP13.16□□□□□ -0.3
NEFM-201ENST00000221166 CCDC94Q9BW85 323 aaPredicted RBP13.16□□□□□ -0.3
NEFM-201ENST00000221166 KCNF1Q9H3M0 494 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
NEFM-201ENST00000221166 HMG20BQ9P0W2 317 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 TAF5LO75529 589 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 TATP17735 454 aaPredicted RBP13.16□□□□□ -0.3
NEFM-201ENST00000221166 GCKRQ14397 625 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 NRXN3Q9Y4C0 1643 aa13.16□□□□□ -0.3
NEFM-201ENST00000221166 TOB2Q14106 344 aaPredicted RBP13.15□□□□□ -0.3
NEFM-201ENST00000221166 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEFM-201ENST00000221166 NCOA5Q9HCD5 579 aaKnown RBP13.15□□□□□ -0.3
NEFM-201ENST00000221166 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
NEFM-201ENST00000221166 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.15□□□□□ -0.3
NEFM-201ENST00000221166 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEFM-201ENST00000221166 ZNF790Q6PG37 636 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 NEURL1BA8MQ27 555 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 IGSF3O75054 1194 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 CLSTN2Q9H4D0 955 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 SNRKQ9NRH2 765 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
NEFM-201ENST00000221166 TIMM10P62072 90 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 TNNI3KQ59H18 835 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 DBNLQ9UJU6 430 aaKnown RBP13.14□□□□□ -0.31
NEFM-201ENST00000221166 FPGT-TNNI3KV9GXZ4 949 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 TCHHQ07283 1943 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 HAND2P61296 217 aa13.14□□□□□ -0.31
NEFM-201ENST00000221166 ZNF496Q96IT1 587 aaPredicted RBP13.14□□□□□ -0.31
NEFM-201ENST00000221166 USP42Q9H9J4 1324 aaKnown RBP13.13□□□□□ -0.31
NEFM-201ENST00000221166 ZNF75DP51815 510 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
NEFM-201ENST00000221166 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
NEFM-201ENST00000221166 CHRNA2Q15822 529 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 PGBD1Q96JS3 809 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 CEMIPQ8WUJ3 1361 aa13.13□□□□□ -0.31
NEFM-201ENST00000221166 POLR3DP05423 398 aaPredicted RBP13.12□□□□□ -0.31
NEFM-201ENST00000221166 CABP4P57796 275 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 CPLX1O14810 134 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 U2AF2P26368 475 aaKnown RBP eCLIP13.12□□□□□ -0.31
NEFM-201ENST00000221166 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
NEFM-201ENST00000221166 ZNF396Q96N95 335 aaPredicted RBP13.12□□□□□ -0.31
NEFM-201ENST00000221166 METTL22Q9BUU2 404 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms