RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 GORABQ5T7V8 394 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 NUP62CLQ9H1M0 184 aa17.9■□□□□ 0.46
EFNB1-201ENST00000204961 CHMP4CQ96CF2 233 aa17.89■□□□□ 0.45
EFNB1-201ENST00000204961 C16orf45Q96MC5 204 aaPredicted RBP17.89■□□□□ 0.45
EFNB1-201ENST00000204961 NECTIN1Q15223 517 aa17.89■□□□□ 0.45
EFNB1-201ENST00000204961 PTPN21Q16825 1174 aa17.89■□□□□ 0.45
EFNB1-201ENST00000204961 WASHC4Q2M389 1173 aa17.89■□□□□ 0.45
EFNB1-201ENST00000204961 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
EFNB1-201ENST00000204961 NR1I2O75469 434 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 CBX1P83916 185 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 TECPR2O15040 1411 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 RXRAP19793 462 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 CCDC186Q7Z3E2 898 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 FILIP1Q7Z7B0 1213 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 ZSWIM6Q9HCJ5 1215 aa17.88■□□□□ 0.45
EFNB1-201ENST00000204961 NEURL1BA8MQ27 555 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 POLR3DP05423 398 aaPredicted RBP17.87■□□□□ 0.45
EFNB1-201ENST00000204961 GCKRQ14397 625 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 PXDNQ92626 1479 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 BIN1O00499 593 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 CABP4P57796 275 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 RNF20Q5VTR2 975 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 PI16Q6UXB8 463 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 DDX21Q9NR30 783 aaKnown RBP eCLIP17.87■□□□□ 0.45
EFNB1-201ENST00000204961 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.87■□□□□ 0.45
EFNB1-201ENST00000204961 V9GYY5 206 aaPredicted RBP17.87■□□□□ 0.45
EFNB1-201ENST00000204961 ARID5BQ14865 1188 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 CCDC144CPQ8IYA2 1237 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 KCNH5Q8NCM2 988 aa17.87■□□□□ 0.45
EFNB1-201ENST00000204961 SSH2Q76I76 1423 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 MON2Q7Z3U7 1717 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 ARHGEF25Q86VW2 580 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 PUS3Q9BZE2 481 aaKnown RBP17.86■□□□□ 0.45
EFNB1-201ENST00000204961 CCDC192P0DO97 292 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
EFNB1-201ENST00000204961 NAA30Q147X3 362 aaPredicted RBP17.86■□□□□ 0.45
EFNB1-201ENST00000204961 MAP3K11Q16584 847 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 LRRC24Q50LG9 513 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 ERC1Q8IUD2 1116 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 TTC41PQ6P2S7 1318 aa17.86■□□□□ 0.45
EFNB1-201ENST00000204961 SYNE4Q8N205 404 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 GOLGB1Q14789 3259 aaKnown RBP17.85■□□□□ 0.45
EFNB1-201ENST00000204961 TYRO3Q06418 890 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
EFNB1-201ENST00000204961 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 NEK1Q96PY6 1258 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 TRMT1Q9NXH9 659 aaKnown RBP17.85■□□□□ 0.45
EFNB1-201ENST00000204961 GPTP24298 496 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 PSMA5P28066 241 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 HSP90AA4PQ58FG1 418 aa17.85■□□□□ 0.45
EFNB1-201ENST00000204961 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
EFNB1-201ENST00000204961 ZNF500O60304 480 aaPredicted RBP17.84■□□□□ 0.45
EFNB1-201ENST00000204961 CYP21A2P08686 494 aa17.84■□□□□ 0.45
EFNB1-201ENST00000204961 PDIA6Q15084 440 aa17.84■□□□□ 0.45
EFNB1-201ENST00000204961 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
EFNB1-201ENST00000204961 RPS6KB1P23443 525 aa17.83■□□□□ 0.45
EFNB1-201ENST00000204961 SASS6Q6UVJ0 657 aa17.83■□□□□ 0.45
EFNB1-201ENST00000204961 CCDC82Q8N4S0 544 aa17.83■□□□□ 0.45
EFNB1-201ENST00000204961 TNNI3KQ59H18 835 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 DIP2AQ14689 1571 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 TAF5LO75529 589 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 ALDH1L1O75891 902 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 ME1P48163 572 aa17.83■□□□□ 0.44
EFNB1-201ENST00000204961 APPP05067 770 aa17.82■□□□□ 0.44
EFNB1-201ENST00000204961 CSPP1Q1MSJ5 1256 aa17.82■□□□□ 0.44
EFNB1-201ENST00000204961 TAF7LQ5H9L4 462 aa17.82■□□□□ 0.44
EFNB1-201ENST00000204961 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
EFNB1-201ENST00000204961 PTPN12Q05209 780 aaKnown RBP17.81■□□□□ 0.44
EFNB1-201ENST00000204961 LEO1Q8WVC0 666 aaPredicted RBP17.81■□□□□ 0.44
EFNB1-201ENST00000204961 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
EFNB1-201ENST00000204961 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
EFNB1-201ENST00000204961 ZNF165P49910 485 aa17.81■□□□□ 0.44
EFNB1-201ENST00000204961 KCNF1Q9H3M0 494 aa17.81■□□□□ 0.44
EFNB1-201ENST00000204961 ATP2B1P20020 1258 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 PGBD1Q96JS3 809 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 STOX1Q6ZVD7 989 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 TOM1L2Q6ZVM7 507 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 AKAP12Q02952 1782 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 SNAP23O00161 211 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 CEMIPQ8WUJ3 1361 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 FAM89AQ96GI7 184 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 MRVI1Q9Y6F6 885 aa17.8■□□□□ 0.44
EFNB1-201ENST00000204961 AOX1Q06278 1338 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 BECN2A8MW95 431 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 CYP27B1O15528 508 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 HSPA2P54652 639 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 SCRN1Q12765 414 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 SF3A1Q15459 793 aaKnown RBP17.79■□□□□ 0.44
EFNB1-201ENST00000204961 HELBQ8NG08 1087 aaPredicted RBP17.79■□□□□ 0.44
EFNB1-201ENST00000204961 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 TOMM22Q9NS69 142 aa17.79■□□□□ 0.44
EFNB1-201ENST00000204961 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
EFNB1-201ENST00000204961 AGLP35573 1532 aa17.78■□□□□ 0.44
EFNB1-201ENST00000204961 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
EFNB1-201ENST00000204961 ATF3P18847 181 aa17.78■□□□□ 0.44
EFNB1-201ENST00000204961 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
EFNB1-201ENST00000204961 GOLGA6L19H0YKK7 550 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms