RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 RIMS1Q86UR5 1692 aaKnown RBP23.57■■□□□ 1.36
PPP1R3F-201ENST00000055335 MAP3K5Q99683 1374 aa23.57■■□□□ 1.36
PPP1R3F-201ENST00000055335 FAM177A1Q8N128 213 aaPredicted RBP23.56■■□□□ 1.36
PPP1R3F-201ENST00000055335 FLT4P35916 1363 aa23.56■■□□□ 1.36
PPP1R3F-201ENST00000055335 POLR3GO15318 223 aaPredicted RBP23.56■■□□□ 1.36
PPP1R3F-201ENST00000055335 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
PPP1R3F-201ENST00000055335 SLU7O95391 586 aaKnown RBP23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 STX1AQ16623 288 aa23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 CFAP45Q9UL16 551 aa23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 LRRN4CLQ8ND94 238 aa23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 SEC62Q99442 399 aaKnown RBP23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 ARHGEF10O15013 1369 aa23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 IQCB1Q15051 598 aa23.55■■□□□ 1.36
PPP1R3F-201ENST00000055335 GTF2E1P29083 439 aaPredicted RBP23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 SNW1Q13573 536 aaKnown RBP23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 FSIP1Q8NA03 581 aa23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 CCDC66A2RUB6 948 aa23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 RBM6P78332 1123 aaKnown RBP23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 PROSER3Q2NL68 480 aa23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 TMC6Q7Z403 805 aa23.54■■□□□ 1.36
PPP1R3F-201ENST00000055335 PTPN21Q16825 1174 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 CCAR2Q8N163 923 aaKnown RBP23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 GOLPH3LQ9H4A5 285 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 IGSF1Q8N6C5 1336 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 CHST3Q7LGC8 479 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 NEK1Q96PY6 1258 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 TMX1Q9H3N1 280 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 SYCP1Q15431 976 aa23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 NCOA5Q9HCD5 579 aaKnown RBP23.53■■□□□ 1.36
PPP1R3F-201ENST00000055335 PRAMEF22A3QJZ6 481 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 ERO1AQ96HE7 468 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 DIP2CQ9Y2E4 1556 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 BTBD11A6QL63 1104 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 SASH1O94885 1247 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 TAF3Q5VWG9 929 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 SF3A1Q15459 793 aaKnown RBP23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 CEP57L1Q8IYX8 460 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 USP28Q96RU2 1077 aa23.52■■□□□ 1.36
PPP1R3F-201ENST00000055335 A0A1B0GVL5 298 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 RESTQ13127 1097 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 ABTB2Q8N961 1025 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 NOL10Q9BSC4 688 aaKnown RBP23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 A2ML1A8K2U0 1454 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 ERC1Q8IUD2 1116 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 TMEM51Q9NW97 253 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 DLC1Q96QB1 1528 aa23.51■■□□□ 1.35
PPP1R3F-201ENST00000055335 EIF4A1P60842 406 aaKnown RBP23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 CCZ1BP86790 482 aa23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 CCZ1P86791 482 aaPredicted RBP23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 HIP1O00291 1037 aa23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 ARHGAP29Q52LW3 1261 aa23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 SUCLG2Q96I99 432 aa23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 ANO10Q9NW15 660 aa23.5■■□□□ 1.35
PPP1R3F-201ENST00000055335 HOXC9P31274 260 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 SLFNL1Q499Z3 407 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 MRFAP1L1Q96HT8 127 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 IFNKQ9P0W0 207 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 SBNO1A3KN83 1393 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 OTUD7BQ6GQQ9 843 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 TIGD1Q96MW7 591 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 PREX1Q8TCU6 1659 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 APOBRQ0VD83 1088 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 NYAP1Q6ZVC0 841 aa23.49■■□□□ 1.35
PPP1R3F-201ENST00000055335 HDGFP51858 240 aaKnown RBP23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 SCRN1Q12765 414 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 RBM43Q6ZSC3 357 aaKnown RBP23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 RAB11FIP4Q86YS3 637 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 NEMFO60524 1076 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 USP6P35125 1406 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 DNAI1Q9UI46 699 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
PPP1R3F-201ENST00000055335 PLEKHG3A1L390 1219 aa23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 POLR3DP05423 398 aaPredicted RBP23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 ZNF446Q9NWS9 450 aa23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 DDX46Q7L014 1031 aaKnown RBP23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 DHX40Q8IX18 779 aaKnown RBP23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 SFPQP23246 707 aaKnown RBP eCLIP23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 PLCD3Q8N3E9 789 aa23.47■■□□□ 1.35
PPP1R3F-201ENST00000055335 IRX5P78411 483 aaPredicted RBP23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 XPO4Q9C0E2 1151 aaKnown RBP23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 EPC1Q9H2F5 836 aa23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 TAF5LO75529 589 aa23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 MYL6BP14649 208 aa23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 LMOD1P29536 600 aaPredicted RBP23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 GNL2Q13823 731 aaKnown RBP23.46■■□□□ 1.35
PPP1R3F-201ENST00000055335 HSP90AA4PQ58FG1 418 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 URI1O94763 535 aaPredicted RBP23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 GOLGA8FQ08AF8 430 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 GOLGA8DPQ0D2H9 430 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 MNS1Q8NEH6 495 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 KCNB2Q92953 911 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 ZSCAN16Q9H4T2 348 aaPredicted RBP23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 PTPDC1A2A3K4 754 aa23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 ZNF530Q6P9A1 599 aaPredicted RBP23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 NAT10Q9H0A0 1025 aaKnown RBP23.45■■□□□ 1.34
PPP1R3F-201ENST00000055335 CDC25BP30305 580 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms