RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Trim27Q62158 513 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Bank1Q80VH0 783 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Flad1Q8R123 492 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Arl10Q9QXJ4 243 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Myom1Q62234 1667 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Rtf1A2AQ19 715 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Ap1g2O88512 791 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Eif4g2Q62448 906 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 IbtkQ6ZPR6 1352 aaKnown RBP10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Fam76aQ922G2 307 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Slc5a4aQ9ET37 656 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 Sh3bgrQ9WUZ7 214 aa10.34□□□□□ -0.75
Prpf40a-208ENSMUST00000210789 MaddQ80U28 1577 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Proca1B0QZF7 307 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 C2cd2E9Q3C1 696 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Rgs22G3UYX5 1258 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 NefhP19246 1090 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ddx46Q569Z5 1032 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Tab3Q571K4 716 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Erlin2Q8BFZ9 340 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Jakmip1Q8BVL9 626 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Wdr60Q8C761 999 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 LifrP42703 1092 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 PrimpolQ6P1E7 537 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Cabp4Q8VHC5 271 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Pes1Q9EQ61 584 aaKnown RBP10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 ChmQ9QXG2 665 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Tex13c2A0A0G2JGA3 530 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Trim30cD3YVI9 513 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 GclcP97494 637 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Wdr93Q402B2 695 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Klra5Q60652 266 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Atf3Q60765 181 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ccdc66Q6NS45 935 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Slu7Q8BHJ9 585 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 PdcQ9QW08 244 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Dpf1Q9QX66 387 aa10.33□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Gm21190A0A0G2JGJ6 266 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ccdc155Q80VJ8 648 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Zswim4Q8C7B8 1101 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Rapgef3Q8VCC8 918 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Smc1bQ920F6 1248 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Alpk3Q924C5 1678 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Idi1P58044 227 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Mex3cQ05A36 652 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Erc2Q6PH08 957 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Efcab8Q8C9R9 203 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Stx6Q9JKK1 255 aa10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Scaf11E9PZM7 1456 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Chd2E9PZM4 1827 aaKnown RBP10.32□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Cct5P80316 541 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Cep89Q9CZX2 791 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Snx1Q9WV80 522 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Kdm5aQ3UXZ9 1690 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Gprasp1Q5U4C1 1347 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Elf1Q60775 612 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Zbtb40Q6PCS8 1258 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Mei4Q8BRM6 389 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Thoc1Q8R3N6 657 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Slx4ipQ9D7Y9 413 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Fyb1O35601 819 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ppp1r7Q3UM45 361 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Fbxo18Q8K2I9 1042 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Sirt1Q923E4 737 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Slit3Q9WVB4 1523 aa10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 CoblQ5NBX1 1337 aaKnown RBP10.31□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Mybl1P51960 751 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Pde1cQ64338 706 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Znf653Q6YND2 615 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Lztr1Q9CQ33 837 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Smc3Q9CW03 1217 aaKnown RBP10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Lmbr1Q9JIT0 490 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Dnm3Q8BZ98 863 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Tlr9Q9EQU3 1032 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Zfp804bA0A0G2JGH6 1343 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Elmsan1E9Q2I4 1089 aaKnown RBP10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Sema3fO88632 785 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 CtcfQ61164 736 aaKnown RBP10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ctnna3Q65CL1 895 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Mphosph10Q810V0 681 aaKnown RBP10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Ehd4Q9EQP2 541 aa10.3□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Atp6v1dP57746 247 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Q3UPC7 1272 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 PsapQ61207 557 aaKnown RBP10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 IqcgQ80W32 419 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Rassf10Q8BL43 508 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Dnaaf2Q8BPI1 814 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Slain2Q8CI08 581 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Arl8aQ8VEH3 186 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Bcar3Q9QZK2 820 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Rb1P13405 921 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Abcf1Q6P542 837 aaKnown RBP10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Mrps27Q8BK72 415 aaKnown RBP10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Fam193aQ8CGI1 1231 aaKnown RBP10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Magi2Q9WVQ1 1275 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Kank3Q9Z1P7 791 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Wdr33Q8K4P0 1330 aaKnown RBP10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 FosbP13346 338 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Traf1P39428 409 aa10.29□□□□□ -0.76
Prpf40a-208ENSMUST00000210789 Nf2P46662 596 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms