RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Vps33bP59016 617 aa11.4□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Rdm1Q9CQK3 281 aa11.4□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Hspa1lP16627 641 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Smarcc1P97496 1104 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Clca2Q8BG22 942 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Tnks1bp1P58871 1720 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Rasa1E9PYG6 1038 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Dmrt2Q8BG36 561 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Rrp9Q91WM3 475 aaKnown RBP11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Dmrtc1Q9D9R7 182 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Nek11Q8C0Q4 628 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Fbxo3Q9DC63 480 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Zfp142G5E869 1843 aa11.39□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Rnf123Q5XPI3 1314 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Mcm4P49717 862 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Bloc1s4Q8VED2 215 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 PtmaP26350 111 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Atp2b3Q0VF55 1220 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Bsdc1Q80Y55 427 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Tti2Q8BGV4 512 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Zkscan8Q8BSL0 588 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Riok1Q922Q2 567 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Antxr1Q9CZ52 562 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Nphp3Q7TNH6 1325 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Vwa3bJ9JI28 736 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Zbtb38Q3LR78 1197 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Nol12Q8BG17 217 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ciao1Q99KN2 339 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Hmg20bQ9Z104 317 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Mst1rQ62190 1378 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ms4a2P20490 235 aa11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ncoa5Q91W39 579 aaKnown RBP11.38□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Irgm2A0A140LIF8 407 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Prr5lA2AVJ5 370 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ftl2P49945 183 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Gdpd2Q9ESM6 539 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Plekho1Q9JIY0 408 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Mybbp1aQ7TPV4 1344 aaKnown RBP11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Plcb3P51432 1234 aaKnown RBP11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Atp8a2P98200 1148 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Zc3h12cQ5DTV4 884 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Itga6Q61739 1091 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 AidaQ8C4Q6 305 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 FocadA2AKG8 1798 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Pde4bB1AWC9 736 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Hap1O35668 628 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Eva1cP58659 440 aa11.37□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 InhbeO08717 350 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Cpa2Q504N0 417 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Tubb6Q922F4 447 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Sos2Q02384 1333 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 TsksO54887 585 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Anxa1P10107 346 aaKnown RBP11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Usp48Q3V0C5 1052 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 VeztQ3ZK22 780 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Atg9aQ68FE2 551 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Rab3gap1Q80UJ7 981 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Fam160b2Q80YR2 744 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ddx60E9PZQ1 1711 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Asap2Q7SIG6 958 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ppp4r3bQ922R5 820 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Glipr1l2Q9CQ35 332 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 MetP16056 1379 aa11.36□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 TnksQ6PFX9 1320 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 F2rP30558 430 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 EappQ5BU09 281 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Kiaa0753Q6A000 959 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Dctn1O08788 1281 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Casc1Q6TDU8 730 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Sgsm2Q80U12 1005 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Cyp19a1P28649 503 aa11.35□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Syt1P46096 421 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Tceanc2Q8R2M0 207 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ccdc7Q9D541 371 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Gpr182P43142 395 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Gimap8Q75N62 688 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Ttc14Q9CSP9 761 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Snrpa1P57784 255 aaKnown RBP11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Lrrfip2Q91WK0 415 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Gm45015A0A140LII9 184 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Gm18336A0A140LIU8 765 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Speer4dL7N216 212 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Lrrc43Q3V0L5 667 aa11.34□□□□□ -0.59
Sh3rf1-202ENSMUST00000209611 Kank4Q6P9J5 1016 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Brd2Q7JJ13 798 aaKnown RBP11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Gtf2a1Q99PM3 378 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rps6ka4Q9Z2B9 773 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ubr2Q6WKZ8 1755 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Ugt1a5B2RT14 529 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 CgnP59242 1191 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tmem67Q8BR76 992 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rbm17Q8JZX4 405 aaKnown RBP11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Cdca7lQ922M5 438 aa11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Mad1l1Q9WTX8 717 aaKnown RBP11.33□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Spty2d1Q68FG3 682 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Lmbrd2Q8C561 694 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 NaspQ99MD9 773 aaKnown RBP11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Rufy3Q9D394 469 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 Tiam2Q6ZPF3 1715 aa11.32□□□□□ -0.6
Sh3rf1-202ENSMUST00000209611 1700006A11RikB9EHI3 544 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms