RNA–Protein interactions for RNA: ENSMUST00000206914.1

Rnf40-206, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-206ENSMUST00000206914 Il1rapl2Q9ERS6 686 aa12.7□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Atp10bB1AWN4 1474 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Col1a2Q01149 1372 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tceanc2Q8R2M0 207 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ccdc112A0AUP1 442 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Zhx1P70121 873 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Kcnd1Q03719 651 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Mdm2P23804 489 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Kif2aP28740 705 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Fkbp4P30416 458 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Limch1Q3UH68 1057 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Larp1Q6ZQ58 1072 aaKnown RBP12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Fam114a1Q9D281 569 aa12.69□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tbc1d4Q8BYJ6 1307 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Casz1Q9CWL2 1761 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Dhx8A2A4P0 1244 aaKnown RBP12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Sox12Q04890 314 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 TfrcQ62351 763 aaKnown RBP12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ube2oQ6ZPJ3 1288 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ercc6lQ8BHK9 1240 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Zfp317Q8C0Q5 607 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Bicc1Q99MQ1 977 aaKnown RBP12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tmem119Q8R138 280 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 D430041D05RikF6ZGR6 1678 aa12.68□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Lnx1O70263 728 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Idi1P58044 227 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Paxbp1P58501 919 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Gpatch3Q8BIY1 525 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Kcnk13Q8R1P5 405 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Flt4P35917 1363 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Kdm6aO70546 1401 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Grm8P47743 908 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Frat1P70339 274 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Btbd11Q6GQW0 1109 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Surf1P09925 306 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ctdnep1Q3TP92 244 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Stac3Q8BZ71 360 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ulbp1Q8HWA3 334 aa12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 StrbpQ91WM1 672 aaKnown RBP12.67□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tshz1Q5DTH5 1084 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Usp28Q5I043 1051 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Mtx1P47802 317 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ap5z1Q3U829 807 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Irf9Q61179 399 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Arhgef1Q61210 920 aaKnown RBP12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ift57Q8BXG3 429 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Nek11Q8C0Q4 628 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 C5P06684 1680 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Anks1aP59672 1150 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Odf2lQ9D478 642 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tubb4aQ9D6F9 444 aa12.66□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Irgm2A0A140LIF8 407 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Map7d2A2AG50 781 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Smarcc2Q6PDG5 1213 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Ccdc121E9Q6D3 323 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Zbtb45Q52KG4 520 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Tmem132eQ6IEE6 982 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Frmd3Q8BHD4 595 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Mrpl44Q9CY73 333 aaKnown RBP12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Pde3aQ9Z0X4 1141 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Sh3bp1P55194 680 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Q8BZJ8 459 aa12.65□□□□□ -0.38
Rnf40-206ENSMUST00000206914 Als2Q920R0 1651 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Tmem87aQ8BXN9 555 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 AceP09470 1312 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Jakmip2D3YXK0 820 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Zfp597E9Q6S0 419 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Ppp1r18Q8BQ30 594 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Arid5bQ8BM75 1188 aaKnown RBP12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 GckrQ91X44 587 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Rgs12Q8CGE9 1381 aa12.64□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Zpr1Q62384 459 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Panx2Q6IMP4 677 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Dhx40Q6PE54 779 aaKnown RBP12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Spag5Q7TME2 1165 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Edc3Q8K2D3 508 aaKnown RBP12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Pcdhb15Q91Y04 786 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Pcdh10E9PXQ7 1057 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 CrebrfQ8CDG5 640 aaKnown RBP12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Col4a3bpQ9EQG9 624 aa12.63□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Snw1Q9CSN1 536 aaKnown RBP12.62□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Cnpy2Q9QXT0 182 aa12.62□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Amotl2Q8K371 772 aa12.62□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Srek1Q8BZX4 494 aaKnown RBP12.62□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Ccer1Q9CQL2 403 aa12.62□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Aox2Q5SGK3 1345 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Nid2O88322 1403 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Znf568E9PYI1 671 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 BrapQ99MP8 591 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Taf7Q9R1C0 341 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Tulp1Q9Z273 543 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Col22a1E9Q7P1 1613 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Tcof1O08784 1320 aaKnown RBP12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Rbbp8nlA2ABX0 614 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Ets1P27577 440 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Vgll3P85442 326 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Naa16Q9DBB4 864 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Dusp10Q9ESS0 483 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 Wdr17E9Q271 1322 aa12.61□□□□□ -0.39
Rnf40-206ENSMUST00000206914 C3P01027 1663 aa12.61□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms