RNA–Protein interactions for RNA: ENSMUST00000192557.1

Pcdh20-202, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 3,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-202ENSMUST00000192557 Q9D9S1 216 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Slc4a1P04919 929 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Nlrp1aQ2LKU9 1182 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Rhot2Q8JZN7 620 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Gsdma2Q32M21 443 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Plcd4Q8K3R3 807 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 Trim34aQ99PP6 485 aa12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 NgdnQ9DB96 315 aaKnown RBP12.9□□□□□ -0.34
Pcdh20-202ENSMUST00000192557 AbraQ8BUZ1 375 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Tsr2Q8C8T8 191 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Kcnq3Q8K3F6 873 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 MypopQ8R4U1 393 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Mrpl50Q8VDT9 159 aaKnown RBP12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Elmsan1E9Q2I4 1089 aaKnown RBP12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 St18Q80TY4 1045 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Krt25Q8VCW2 446 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Lrrfip2Q91WK0 415 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Ank1Q02357 1862 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Susd4Q8BH32 490 aa12.89□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 TnksQ6PFX9 1320 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Smarcc1P97496 1104 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Usp48Q3V0C5 1052 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Itga6Q61739 1091 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Add2Q9QYB8 725 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 GakQ99KY4 1305 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Smarce1O54941 411 aaKnown RBP12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Sema6bO54951 886 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Gadd45bP22339 160 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Cyp2d10P24456 504 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Zbtb38Q3LR78 1197 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Kank4Q6P9J5 1016 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Nyap1Q6PFX7 833 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Nav1Q8CH77 1875 aa12.88□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Trim34bJ3QNR8 485 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Atp2b3Q0VF55 1220 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Trim56Q80VI1 734 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Mapk8ip1Q9WVI9 707 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Hoxa7P02830 229 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Hand2Q61039 217 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Pknox2Q8BG99 474 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Pdlim2Q8R1G6 349 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Sytl4Q9R0Q1 673 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 MetP16056 1379 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Bin2D3Z6Q9 489 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 FosbP13346 338 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 EappQ5BU09 281 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 StrbpQ91WM1 672 aaKnown RBP12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Ssc5dQ8BV57 1371 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Rnf123Q5XPI3 1314 aa12.87□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Atp6v1dP57746 247 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Sgsm2Q80U12 1005 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Mb21d2Q8C525 428 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Tktl2Q9D4D4 627 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Prl7a2O54831 253 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Asap2Q7SIG6 958 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Ubxn10Q8BG34 277 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Tbc1d7Q9D0K0 293 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Syt1P46096 421 aa12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Smc3Q9CW03 1217 aaKnown RBP12.86□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Fam102bQ8BQS4 339 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Irgm2A0A140LIF8 407 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Cers3Q1A3B0 383 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Rnf20Q5DTM8 973 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Bms1Q6PGF5 1284 aaKnown RBP12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Nek11Q8C0Q4 628 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Atf7Q8R0S1 413 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 CpvlQ9D3S9 478 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Sept12Q9D451 317 aa12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Tnrc6cQ3UHC0 1690 aaKnown RBP12.85□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Gm13023A2A8N2 498 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 TsksO54887 585 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 PhaxQ9JJT9 385 aaKnown RBP12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Foxo4Q9WVH3 505 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Srp68Q8BMA6 625 aaKnown RBP12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Gtf3c5Q8R2T8 520 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Ccdc7Q9D541 371 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Gm45015A0A140LII9 184 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Gm18336A0A140LIU8 765 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 CltaO08585 235 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Pram1Q6BCL1 675 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Sptlc3Q8BG54 563 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Mrc1Q61830 1456 aa12.84□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 AtrnQ9WU60 1428 aa12.83□□□□□ -0.35
Pcdh20-202ENSMUST00000192557 Plcb3P51432 1234 aaKnown RBP12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Kif20aP97329 887 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Rbm27Q5SFM8 1060 aaKnown RBP12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Fam170aQ66LM6 333 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Tmem266Q8BZB3 538 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Sugp2Q8CH09 1067 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Mast2Q60592 1734 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Spty2d1Q68FG3 682 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Dmrt2Q8BG36 561 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Emilin1Q99K41 1017 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Ciao1Q99KN2 339 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Erc1Q99MI1 1120 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Mad1l1Q9WTX8 717 aaKnown RBP12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Stox1B2RQL2 990 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 SlkO54988 1233 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Zc3h12cQ5DTV4 884 aa12.83□□□□□ -0.36
Pcdh20-202ENSMUST00000192557 Lmod1Q8BVA4 595 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms