RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Rnf41Q8BH75 317 aa18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Rbm19Q8R3C6 952 aaKnown RBP18.42■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Prr29B1ARI9 187 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ube2hP62257 183 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tmod2Q9JKK7 351 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Mctp2Q5RJH2 878 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ptcd1Q8C2E4 695 aaKnown RBP18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 SnrkQ8VDU5 748 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tut1Q8R3F9 869 aa18.41■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Wdr63B2RY71 923 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Atp2b3Q0VF55 1220 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ncf1Q09014 390 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Arhgef18Q6P9R4 1021 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Bicc1Q99MQ1 977 aaKnown RBP18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Tsg101Q61187 391 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Skor1Q8BX46 964 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Homer1Q9Z2Y3 366 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Cpsf1Q9EPU4 1441 aaKnown RBP18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Ccdc112A0AUP1 442 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Sdc2P43407 202 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Gng11P61953 73 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Klhl10Q9D5V2 608 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 Liat1Q810M6 228 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 RalylQ8BTF8 293 aa18.4■□□□□ 0.54
Pcdh1-203ENSMUST00000160721 AU022751B1B0V2 589 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Nfxl1E9Q8I7 918 aaKnown RBP18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Pa2g4P50580 394 aaKnown RBP18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Hand2Q61039 217 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Bsdc1Q80Y55 427 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Slc35g1Q8BY79 368 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Pola1P33609 1465 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Nucb2P81117 420 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Tbc1d32Q3URV1 1296 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ccdc12Q8R344 166 aaKnown RBP18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Zscan29E9Q5B4 869 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Usp25P57080 1055 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 SympkQ80X82 1284 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Znf526Q8BI66 675 aa18.39■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Lmo7E9PYF4 1699 aaKnown RBP18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Serpinb6bO08804 377 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Pprc1Q6NZN1 1644 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 KdrP35918 1367 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Nphp4P59240 1425 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Rad23bP54728 416 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ift74Q8BKE9 600 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Zbtb3Q91X45 518 aa18.38■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Gjc1P28229 396 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 ClasrpQ8CFC7 668 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Pdzd9Q9D9M4 266 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ankrd1Q9CR42 319 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Dbndd1Q9CZ00 160 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Fam107bQ3TGF2 131 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Fam170aQ66LM6 333 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Nap1l5Q9JJF0 156 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Plekhg2Q6KAU7 1340 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 LyarQ08288 388 aaKnown RBP18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Sh3tc1G3X9F6 1346 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Kdm3aQ6PCM1 1323 aa18.37■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ttll12Q3UDE2 639 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Vps37cQ8R105 352 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Krt25Q8VCW2 446 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ctnnbl1Q9CWL8 563 aaKnown RBP18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Zmym4A2A791 1549 aaKnown RBP18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Bloc1s2Q9CWG9 143 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 CpvlQ9D3S9 478 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Baiap2l1Q9DBJ3 514 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Fhod3Q76LL6 1578 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Mcm6P97311 821 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Ano2Q8CFW1 1002 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Hdac9Q99N13 588 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Smc1aQ9CU62 1233 aaKnown RBP18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Mrpl12Q9DB15 201 aaKnown RBP18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Usp54Q8BL06 1588 aaKnown RBP18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Cfap73J3QPZ5 306 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Traf3ip1Q149C2 625 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Lman1Q9D0F3 517 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Cetn2Q9R1K9 172 aa18.36■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Gm12185Q5NCB2 835 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Tex19.1Q99MV2 351 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Cops6O88545 324 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Larp6Q8BN59 492 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Fam177a1Q8BR63 207 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Sgsm1Q8BPQ7 1093 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Smtnl1Q99LM3 459 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Gcc2Q8CHG3 1679 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Lmod1Q8BVA4 595 aa18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Mrpl44Q9CY73 333 aaKnown RBP18.35■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Stx8O88983 236 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Zcrb1Q9CZ96 217 aaKnown RBP18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Edc4Q3UJB9 1406 aaKnown RBP18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Asic4Q7TNS7 539 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Q9D5Q8 446 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Kank1E9Q238 1360 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 CltaO08585 235 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Cnga2Q62398 664 aa18.34■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Snx13Q6PHS6 957 aa18.33■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Foxo3Q9WVH4 672 aa18.33■□□□□ 0.53
Pcdh1-203ENSMUST00000160721 Bms1Q6PGF5 1284 aaKnown RBP18.33■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Naa15Q80UM3 865 aaKnown RBP18.33■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 4921504E06RikQ8CET2 560 aa18.33■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 40.8 ms