RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Stat1P42225 749 aa17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Vgll3P85442 326 aa17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Ppp1r10Q80W00 888 aaKnown RBP17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Arid5bQ8BM75 1188 aaKnown RBP17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Zfp317Q8C0Q5 607 aa17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Gtpbp4Q99ME9 634 aaKnown RBP17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 C3P01027 1663 aa17.25■□□□□ 0.35
Vcan-205ENSMUST00000159337 Stx1aO35526 288 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Mtx1P47802 317 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Kcnd1Q03719 651 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Zpr1Q62384 459 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Tbc1d4Q8BYJ6 1307 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Nid2O88322 1403 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Fbxl16A2RT62 479 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 TrdnE9Q9K5 693 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 MecomP14404 1042 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Sh3bp1P55194 680 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Rrp1P56183 494 aaKnown RBP17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Frmd3Q8BHD4 595 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Mtmr3Q8K296 1196 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Kcnk13Q8R1P5 405 aa17.24■□□□□ 0.35
Vcan-205ENSMUST00000159337 Idi1P58044 227 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Tpm1P58771 284 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Zkscan4Q5SZT6 480 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Map3k2Q61083 619 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Slu7Q8BHJ9 585 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Cdca8Q8BHX3 289 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Frat1P70339 274 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Ano8Q6PB70 1060 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Rhot2Q8JZN7 620 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Edc3Q8K2D3 508 aaKnown RBP17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Bicc1Q99MQ1 977 aaKnown RBP17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Irx6Q9ER75 438 aa17.23■□□□□ 0.35
Vcan-205ENSMUST00000159337 Slc26a8Q8R0C3 999 aa17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 StrbpQ91WM1 672 aaKnown RBP17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 Fkbp4P30416 458 aa17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 HellsQ60848 821 aa17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 Dhx40Q6PE54 779 aaKnown RBP17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 Larp1Q6ZQ58 1072 aaKnown RBP17.22■□□□□ 0.35
Vcan-205ENSMUST00000159337 Anks1aP59672 1150 aa17.21■□□□□ 0.35
Vcan-205ENSMUST00000159337 Pcdhb15Q91Y04 786 aa17.21■□□□□ 0.35
Vcan-205ENSMUST00000159337 Odf2lQ9D478 642 aa17.21■□□□□ 0.35
Vcan-205ENSMUST00000159337 Robo1O89026 1612 aa17.21■□□□□ 0.35
Vcan-205ENSMUST00000159337 Sox12Q04890 314 aa17.21■□□□□ 0.34
Vcan-205ENSMUST00000159337 Tmem132eQ6IEE6 982 aa17.21■□□□□ 0.34
Vcan-205ENSMUST00000159337 Hook1Q8BIL5 728 aa17.21■□□□□ 0.34
Vcan-205ENSMUST00000159337 Cnpy2Q9QXT0 182 aa17.21■□□□□ 0.34
Vcan-205ENSMUST00000159337 Ets1P27577 440 aa17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Smarcc2Q6PDG5 1213 aa17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Ift57Q8BXG3 429 aa17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Snw1Q9CSN1 536 aaKnown RBP17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Kdm6aO70546 1401 aa17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Rgs12Q8CGE9 1381 aa17.2■□□□□ 0.34
Vcan-205ENSMUST00000159337 Tmem87aQ8BXN9 555 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Tmem119Q8R138 280 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Iffo2Q8R2V2 512 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Mst1rQ62190 1378 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Ccdc112A0AUP1 442 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Kif2aP28740 705 aa17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 PsapQ61207 557 aaKnown RBP17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 PhaxQ9JJT9 385 aaKnown RBP17.19■□□□□ 0.34
Vcan-205ENSMUST00000159337 Grm8P47743 908 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Tshz1Q5DTH5 1084 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Dusp10Q9ESS0 483 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Zfp597E9Q6S0 419 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Btbd11Q6GQW0 1109 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Q8BZJ8 459 aa17.18■□□□□ 0.34
Vcan-205ENSMUST00000159337 Limch1Q3UH68 1057 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Fam53cQ8BXQ8 393 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Gtf3c5Q8R2T8 520 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Atp2b1G5E829 1220 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Paxbp1P58501 919 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Panx2Q6IMP4 677 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Nek11Q8C0Q4 628 aa17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 Golph3lQ8R088 285 aaKnown RBP17.17■□□□□ 0.34
Vcan-205ENSMUST00000159337 MpndQ3TV65 487 aa17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Irf9Q61179 399 aa17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Amotl2Q8K371 772 aa17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Elf2Q9JHC9 593 aa17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Ric1Q69ZJ7 1422 aa17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Mrpl44Q9CY73 333 aaKnown RBP17.16■□□□□ 0.34
Vcan-205ENSMUST00000159337 Aox2Q5SGK3 1345 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Ddx60E9PZQ1 1711 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Irgm2A0A140LIF8 407 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Nkx2-3P97334 362 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Gpatch3Q8BIY1 525 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Spata32Q8C5V0 334 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 4930504O13RikQ8C5Z9 145 aa17.15■□□□□ 0.34
Vcan-205ENSMUST00000159337 Znf568E9PYI1 671 aa17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 H2afxP27661 143 aaKnown RBP17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 Kcnj4P52189 445 aa17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 Ifit1Q64282 463 aa17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 GckrQ91X44 587 aa17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 Nfat5Q9WV30 1534 aa17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 Tcof1O08784 1320 aaKnown RBP17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 AatfQ9JKX4 526 aaKnown RBP17.14■□□□□ 0.33
Vcan-205ENSMUST00000159337 XpcP51612 930 aa17.13■□□□□ 0.33
Vcan-205ENSMUST00000159337 Phf20l1Q8CCJ9 1013 aa17.13■□□□□ 0.33
Vcan-205ENSMUST00000159337 Tmem132aQ922P8 1018 aa17.13■□□□□ 0.33
Vcan-205ENSMUST00000159337 Trim59Q922Y2 403 aa17.13■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms