RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 4930572O03RikQ8C5Y0 211 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 E4f1Q8CCE9 783 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cplx1P63040 134 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Vps54Q5SPW0 977 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Kank4Q6P9J5 1016 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ano6Q6P9J9 911 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Oxsr1Q6P9R2 527 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Prkab2Q6PAM0 271 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Frmd3Q8BHD4 595 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Adgrb1Q3UHD1 1582 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm21663A0A0G2JE01 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm7361D3Z6R1 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 5031410I06RikE9Q4E0 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm1979E9QAN3 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm5862K7N5V5 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm10220K7N660 267 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gsdma2Q32M21 443 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Spty2d1Q68FG3 682 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cdca8Q8BHX3 289 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 AidaQ8C4Q6 305 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rec8Q8C5S7 591 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Syt10Q9R0N4 523 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Slit3Q9WVB4 1523 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Oas2E9Q9A9 742 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cplx2P84086 134 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Slc39a6Q8C145 765 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 DpydQ8CHR6 1025 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Otud6bQ8K2H2 294 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Bmp2kQ91Z96 1138 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Pdzd9Q9D9M4 266 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Slit2Q9R1B9 1521 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 TrdnE9Q9K5 693 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Adora1Q60612 326 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm21985Q6P6P5 1106 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rab3gap1Q80UJ7 981 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ubxn10Q8BG34 277 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Tmem67Q8BR76 992 aa9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Eif3bQ8JZQ9 803 aaKnown RBP9.65□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Brpf3B2KF05 1204 aaKnown RBP9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 GnpatP98192 678 aa9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ltv1Q6NSQ7 470 aaKnown RBP9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 OptnQ8K3K8 584 aa9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Tomm22Q9CPQ3 142 aa9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 LratQ9JI60 231 aa9.65□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Med1Q925J9 1575 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 HdgfP51859 237 aaKnown RBP9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 LyarQ08288 388 aaKnown RBP9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ano10Q8BH79 659 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Speer4bQ9D9F7 267 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Osbpl5Q9ER64 874 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Nfe2l3Q9WTM4 660 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Wdr17E9Q271 1322 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Klhl34A2AI76 644 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 NmiO35309 314 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Csrnp1P59054 583 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 1700113H08RikE9Q9Q5 327 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ppp4r3aQ6P2K6 820 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Gys2Q8VCB3 704 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Rbm42Q91V81 474 aaKnown RBP9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Cdc45Q9Z1X9 566 aa9.64□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Clec11aO88200 328 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 BcanQ61361 883 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 DbnlQ62418 436 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ppp1r37Q8BKR5 712 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Plcd3Q8K2J0 785 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 StrbpQ91WM1 672 aaKnown RBP9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ccdc47Q9D024 483 aaKnown RBP9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Phkg2Q9DB30 406 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Col16a1Q8BLX7 1580 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Dhx38Q80X98 1228 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ttc19Q8CC21 365 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Krt25Q8VCW2 446 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 BrapQ99MP8 591 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Flt4P35917 1363 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Hap1O35668 628 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Atf3Q60765 181 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Zpr1Q62384 459 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Morc2aQ69ZX6 1030 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Slc5a1Q8C3K6 665 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Farp2Q91VS8 1065 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Odf2lQ9D478 642 aa9.63□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ptpn23Q6PB44 1692 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Cep135Q6P5D4 1140 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Aox2Q5SGK3 1345 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 RictorQ6QI06 1708 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Prl7a2O54831 253 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Me1P06801 572 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Tpm1P58771 284 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Zkscan4Q5SZT6 480 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Prl3d3A0A0M6L0J6 224 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ttll7A4Q9F0 912 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ifit1Q64282 463 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Tbc1d30Q69ZT9 766 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Lmbrd2Q8C561 694 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Nrbp1Q99J45 535 aa9.62□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Timm10P62073 90 aa9.61□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Hand2Q61039 217 aa9.61□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Ccdc82Q6PG04 518 aa9.61□□□□□ -0.87
Bdnf-208ENSMUST00000111049 Fsd2Q8BZ52 692 aa9.61□□□□□ -0.87
Bdnf-208ENSMUST00000111049 ImmtQ8CAQ8 757 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms