RNA–Protein interactions for RNA: ENSMUST00000102612.1

Ccdc42-202, Transcript of Coiled-coil domain-containing protein 42, mousemouse

TSL 1 (best) BASIC

Gene Ccdc42, Length 785 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc42-202ENSMUST00000102612 GptQ8QZR5 496 aa12.99□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 KarsQ99MN1 595 aaKnown RBP12.99□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Dydc2Q9D3X8 139 aa12.99□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Tnip1Q9WUU8 647 aa12.99□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Myh1Q5SX40 1942 aa12.99□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Znf609Q8BZ47 1413 aa12.98□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 MypnQ5DTJ9 1315 aa12.98□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Oas2E9Q9A9 742 aa12.98□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Bicc1Q99MQ1 977 aaKnown RBP12.98□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Adarb2Q9JI20 745 aa12.98□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Cyp2d11P24457 504 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 CanxP35564 591 aaKnown RBP12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Chl1P70232 1209 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 NfixP70257 488 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 EappQ5BU09 281 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Best3Q6H1V1 669 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Plekhg6Q8R0J1 787 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Echdc1Q9D9V3 322 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Ltn1Q6A009 1767 aa12.97□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Arap2Q8BZ05 1703 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Nectin2P32507 530 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Rps8P62242 208 aaKnown RBP12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Llgl2Q3TJ91 1027 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Map3k2Q61083 619 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Fstl1Q62356 306 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Ddx58Q6Q899 926 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Tmco5bQ80X59 307 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Angel2Q8K1C0 544 aa12.96□□□□□ -0.33
Ccdc42-202ENSMUST00000102612 Col1a1P11087 1453 aa12.96□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 G3bp1P97855 465 aaKnown RBP12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Fkbp5Q64378 456 aa12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Clca2Q8BG22 942 aa12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Skor1Q8BX46 964 aa12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Stard3nlQ9DCI3 235 aa12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Gdf11Q9Z1W4 405 aa12.95□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Ccdc171E9Q1U1 1324 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Exoc6bA6H5Z3 810 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Glis3Q6XP49 780 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Plekhm2Q80TQ5 1018 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Ppm1mQ8BU27 406 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Kif2cQ922S8 721 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Cwc25Q9DBF7 416 aa12.94□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Map3k15A2AQW0 1331 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Myo3bQ1EG27 1305 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 NynrinQ5DTZ0 1840 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 GmpsQ3THK7 693 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Tor1aip2Q8BYU6 502 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Fam213aQ9CYH2 218 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Ehd4Q9EQP2 541 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Fzd9Q9R216 592 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Lgr5Q9Z1P4 907 aa12.93□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Zbtb38Q3LR78 1197 aa12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Pdzrn3Q69ZS0 1063 aa12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Mphosph10Q810V0 681 aaKnown RBP12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Ttc19Q8CC21 365 aa12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Tm4sf4Q91XD3 202 aa12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Naa16Q9DBB4 864 aa12.92□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Nrxn2E9Q7X7 1710 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Pou3f3P31361 497 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Aifm3Q3TY86 605 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 BcanQ61361 883 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 CbarpQ66L44 698 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Scaf8Q6DID3 1268 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 HlfQ8BW74 295 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Slc51aQ8R000 340 aa12.91□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 EvplQ9D952 2035 aa12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Trim34bJ3QNR8 485 aa12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Bend4P86174 541 aa12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Igf2bp3Q9CPN8 579 aaKnown RBP12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Klf15Q9EPW2 415 aa12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Slfn1Q9Z0I7 337 aa12.9□□□□□ -0.34
Ccdc42-202ENSMUST00000102612 Heg1E9Q7X6 1337 aa12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 NmiO35309 314 aa12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Rps12P63323 132 aaKnown RBP12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 NyxP83503 476 aa12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ddx46Q569Z5 1032 aaKnown RBP12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Cnot7Q60809 285 aa12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Cavin2Q63918 418 aaKnown RBP12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Greb1lB9EJV3 1913 aa12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Kiaa0232Q80U59 1396 aaKnown RBP12.89□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Psmd14O35593 310 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Plcb3P51432 1234 aaKnown RBP12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 VeztQ3ZK22 780 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ripor2Q80U16 1078 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ric3Q8BPM6 367 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 McamQ8R2Y2 648 aaKnown RBP12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Popdc2Q9ES82 367 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Tbc1d8Q9Z1A9 1134 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ecm29Q6PDI5 1840 aa12.88□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 4931408C20RikE9PWP9 1381 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Cfdp1O88271 295 aaKnown RBP12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Cxcl9P18340 126 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Zap70P43404 618 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Map3k13Q1HKZ5 959 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ptrh1Q8BW00 204 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Lmbr1lQ9D1E5 489 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Ripk3Q9QZL0 486 aa12.87□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Carmil3Q3UFQ8 1375 aa12.86□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 Celf1P28659 486 aaKnown RBP12.86□□□□□ -0.35
Ccdc42-202ENSMUST00000102612 HellsQ60848 821 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms