RNA–Protein interactions for RNA: ENSMUST00000093975.11

Rffl-204, Transcript of E3 ubiquitin-protein ligase rififylin, mousemouse

TSL 1 (best) BASIC

Gene Rffl, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rffl-204ENSMUST00000093975 Tsen34Q8BMZ5 316 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 SnrkQ8VDU5 748 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 GckrQ91X44 587 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Sh3bp1P55194 680 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Cct2P80314 535 aaKnown RBP11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Atp1a3Q6PIC6 1013 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Zfp317Q8C0Q5 607 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Rhot2Q8JZN7 620 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Hmg20bQ9Z104 317 aa11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Tnrc6bQ8BKI2 1810 aaKnown RBP11.5□□□□□ -0.57
Rffl-204ENSMUST00000093975 Zkscan4Q5SZT6 480 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ube2oQ6ZPJ3 1288 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ccdc155Q80VJ8 648 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Slc35g1Q8BY79 368 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Tubb6Q922F4 447 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Myo5bP21271 1818 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Clec11aO88200 328 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Tpm1P58771 284 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Limch1Q3UH68 1057 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Mtmr3Q8K296 1196 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Kcnk13Q8R1P5 405 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Zkscan5Q9Z1D8 819 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Tbc1d4Q8BYJ6 1307 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 AppP12023 770 aa11.49□□□□□ -0.57
Rffl-204ENSMUST00000093975 Rbbp8nlA2ABX0 614 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Dnaaf4Q8R368 420 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ddx41Q91VN6 622 aaKnown RBP11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Lrrfip2Q91WK0 415 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Camta1A2A891 1682 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ccdc112A0AUP1 442 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ddx46Q569Z5 1032 aaKnown RBP11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 L1td1Q587J6 782 aaKnown RBP11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Col1a2Q01149 1372 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Atp2b1G5E829 1220 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Q8C5K5 320 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ccdc158Q8CDI6 1109 aa11.48□□□□□ -0.57
Rffl-204ENSMUST00000093975 Fsd1Q7TPM6 496 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 StrbpQ91WM1 672 aaKnown RBP11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Elf2Q9JHC9 593 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Kcnj4P52189 445 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Mrpl44Q9CY73 333 aaKnown RBP11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Bin1O08539 588 aaKnown RBP11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ms4a1P19437 291 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 GpkowQ56A08 488 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Vps54Q5SPW0 977 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 SympkQ80X82 1284 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Stac3Q8BZ71 360 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Mst1rQ62190 1378 aa11.47□□□□□ -0.57
Rffl-204ENSMUST00000093975 Nkx2-3P97334 362 aa11.46□□□□□ -0.57
Rffl-204ENSMUST00000093975 Ercc3P49135 783 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Nek11Q8C0Q4 628 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Znf568E9PYI1 671 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Serpinb6bO08804 377 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Rrp1P56183 494 aaKnown RBP11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ercc6lQ8BHK9 1240 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Pms1Q8K119 917 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Golph3lQ8R088 285 aaKnown RBP11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Odf2lQ9D478 642 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Dusp10Q9ESS0 483 aa11.46□□□□□ -0.58
Rffl-204ENSMUST00000093975 Trpm3Q5F4S9 1721 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Prl7a2O54831 253 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Hspa2P17156 633 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Irx2P81066 474 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Dhx38Q80X98 1228 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Q8BZJ8 459 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ddx27Q921N6 760 aaKnown RBP11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Snw1Q9CSN1 536 aaKnown RBP11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Abcc10Q8R4P9 1501 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Adora1Q60612 326 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 DbnlQ62418 436 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Frat2Q8K025 231 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Zeb2Q9R0G7 1215 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Pik3c2aQ61194 1686 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 Tmem94Q7TSH8 1360 aa11.45□□□□□ -0.58
Rffl-204ENSMUST00000093975 TrdnE9Q9K5 693 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Paxbp1P58501 919 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Luzp1Q8R4U7 1068 aaKnown RBP11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 LratQ9JI60 231 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ahnak2E9PYB0 1738 aaKnown RBP11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Gm10471E9Q1C7 252 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Samsn1P57725 372 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Dhx40Q6PE54 779 aaKnown RBP11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Nxf7Q80SZ6 620 aaKnown RBP11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Cdca8Q8BHX3 289 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Rreb1Q3UH06 1700 aaKnown RBP11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 NalcnQ8BXR5 1738 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 HellsQ60848 821 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Stk38Q91VJ4 465 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Pus3Q9JI38 481 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ptpn23Q6PB44 1692 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ubr1O70481 1757 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Col16a1Q8BLX7 1580 aa11.44□□□□□ -0.58
Rffl-204ENSMUST00000093975 Map2P20357 1828 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Rad17Q6NXW6 688 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Ccdc82Q6PG04 518 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Q8BT18 775 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Lmbrd2Q8C561 694 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Rufy2Q8R4C2 606 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Dnajc10Q9DC23 793 aa11.43□□□□□ -0.58
Rffl-204ENSMUST00000093975 Flt4P35917 1363 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms