RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 EspnlQ3UYR4 1005 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 NfkbibQ60778 359 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 DbnlQ62418 436 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Atg9aQ68FE2 551 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Dhx38Q80X98 1228 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 AnlnQ8K298 1121 aaKnown RBP9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Tmc2Q8R4P4 888 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ciao1Q99KN2 339 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 LlphQ9D945 130 aaKnown RBP9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Cyp27a1Q9DBG1 533 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rapgef4Q9EQZ6 1011 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rps6ka4Q9Z2B9 773 aa9.11□□□□□ -0.95
Trim40-201ENSMUST00000087158 Rad50P70388 1312 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ssc5dQ8BV57 1371 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Fam117bQ3U3E2 584 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Nol10Q5RJG1 687 aaKnown RBP9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Adam1aQ60813 791 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Clca2Q8BG22 942 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Nsfl1cQ9CZ44 370 aaKnown RBP9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Fbxo3Q9DC63 480 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Prr5lA2AVJ5 370 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Eya2O08575 532 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ms4a2P20490 235 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Zbtb45Q52KG4 520 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Ddx11Q6AXC6 880 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Fam102bQ8BQS4 339 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Jakmip1Q8BVL9 626 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Top1mtQ8R4U6 593 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Chmp3Q9CQ10 224 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 LratQ9JI60 231 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Abca3Q8R420 1704 aa9.1□□□□□ -0.95
Trim40-201ENSMUST00000087158 Greb1lB9EJV3 1913 aa9.09□□□□□ -0.95
Trim40-201ENSMUST00000087158 Mctp2Q5RJH2 878 aa9.09□□□□□ -0.95
Trim40-201ENSMUST00000087158 Il1rapl2Q9ERS6 686 aa9.09□□□□□ -0.95
Trim40-201ENSMUST00000087158 Casq1O09165 405 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Gsdma2Q32M21 443 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Miga2Q8BK03 593 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Sgsm1Q8BPQ7 1093 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 GptQ8QZR5 496 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rrs1Q9CYH6 365 aaKnown RBP9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Myh1Q5SX40 1942 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Cops6O88545 324 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Stk11ipQ3TAA7 1072 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Paxip1Q6NZQ4 1056 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Bsdc1Q80Y55 427 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Mlh1Q9JK91 760 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Kdm3aQ6PCM1 1323 aa9.08□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rbbp8nlA2ABX0 614 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Igflr1Q3U4N7 345 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ifit2Q64112 472 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Esco1Q69Z69 843 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Slf2Q6P9P0 1278 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Tmem266Q8BZB3 538 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Lama4P97927 1816 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ankrd31A0A140LI88 1765 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Col22a1E9Q7P1 1613 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Smarce1O54941 411 aaKnown RBP9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Timm10P62073 90 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 BcanQ61361 883 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Tshz3Q8CGV9 1081 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Foxo4Q9WVH3 505 aa9.07□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ltbp1Q8CG19 1712 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Plcb2A3KGF7 1181 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Phactr2B1AVP0 632 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Vwa3bJ9JI28 736 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Atp6v1dP57746 247 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Atp8a2P98200 1148 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ubxn10Q8BG34 277 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Trim34aQ99PP6 485 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ccdc7Q9D541 371 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 PhaxQ9JJT9 385 aaKnown RBP9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Add2Q9QYB8 725 aa9.06□□□□□ -0.96
Trim40-201ENSMUST00000087158 Trim34bJ3QNR8 485 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 MecomP14404 1042 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ftl2P49945 183 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Vps54Q5SPW0 977 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Utp18Q5SSI6 552 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Repin1Q5U4E2 545 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Asap2Q7SIG6 958 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Zkscan1Q8BGS3 561 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Krt25Q8VCW2 446 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rdm1Q9CQK3 281 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Mdm2P23804 489 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 EvcP57680 1005 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Strn4P58404 760 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Znf692Q3U381 531 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Cyp7a1Q64505 503 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Pdzrn3Q69ZS0 1063 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rrp12Q6P5B0 1295 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Filip1lQ6P6L0 1131 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ints3Q7TPD0 1041 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 KinQ8K339 391 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ncoa5Q91W39 579 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Bmp2kQ91Z96 1138 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ttc14Q9CSP9 761 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Nphp3Q7TNH6 1325 aa9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Mybbp1aQ7TPV4 1344 aaKnown RBP9.05□□□□□ -0.96
Trim40-201ENSMUST00000087158 Bicdl1A0JNT9 577 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Gpr182P43142 395 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 ZyxQ62523 564 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms