RNA–Protein interactions for RNA: ENSMUST00000042345.6

Ctnna1-201, Transcript of Catenin alpha-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctnna1, Length 3,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna1-201ENSMUST00000042345 Atf7Q8R0S1 413 aa10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Arfgef1G3X9K3 1846 aaKnown RBP10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 St18Q80TY4 1045 aa10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Rps6kb1Q8BSK8 525 aa10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Ptcd1Q8C2E4 695 aaKnown RBP10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Zeb2Q9R0G7 1215 aa10.98□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 PrkcshO08795 521 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Kcnq5Q9JK45 933 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Ltbp1Q8CG19 1712 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Vps33bP59016 617 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Sik1Q60670 779 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Ginm1Q91WR6 327 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Myd88P22366 296 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Ccnl1Q52KE7 532 aaKnown RBP10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Acsbg1Q99PU5 721 aa10.97□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Duox1A2AQ92 1551 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Plcb2A3KGF7 1181 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Gtf3c3Q3TMP1 882 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Fbxo3Q9DC63 480 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Stard3nlQ9DCI3 235 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 Foxo4Q9WVH3 505 aa10.96□□□□□ -0.65
Ctnna1-201ENSMUST00000042345 4931408C20RikE9PWP9 1381 aa10.96□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 NpeppsQ11011 920 aa10.96□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ccdc129Q14B48 1034 aa10.96□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Dcaf5Q80T85 946 aa10.96□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Kdm3aQ6PCM1 1323 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Exosc10P56960 887 aaKnown RBP10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Plekhf1Q3TB82 279 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Vps54Q5SPW0 977 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Tmem266Q8BZB3 538 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Zfp113Q8C689 439 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Rdm1Q9CQK3 281 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 LratQ9JI60 231 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Znfx1Q8R151 1909 aaKnown RBP10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Carmil3Q3UFQ8 1375 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Jarid2Q62315 1234 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Glipr1l2Q9CQ35 332 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 4931400O07RikQ9D4M5 137 aa10.95□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Cyp3a57D3YYZ0 503 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Atp8a2P98200 1148 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Gadd45bP22339 160 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ctdnep1Q3TP92 244 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Kank4Q6P9J5 1016 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Stx6Q9JKK1 255 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 FanccP50652 591 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Smarcc2Q6PDG5 1213 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Q9D9S1 216 aa10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 PhaxQ9JJT9 385 aaKnown RBP10.94□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Wdr19Q3UGF1 1341 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Pof1bQ8K4L4 587 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ankrd23Q812A3 306 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Psma5Q9Z2U1 241 aaKnown RBP10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Sall1Q9ER74 1322 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Znf609Q8BZ47 1413 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Clcn1Q64347 994 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Bms1Q6PGF5 1284 aaKnown RBP10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Map10Q8BJS7 891 aa10.93□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Klhl34A2AI76 644 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 4933416C03RikQ3V063 378 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Polr3dQ91WD1 398 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Tubb6Q922F4 447 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ppp4r3bQ922R5 820 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Pde4dQ01063 747 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Q8C5K5 320 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Krt25Q8VCW2 446 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Pde3aQ9Z0X4 1141 aa10.92□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Cyp2d34L7N463 504 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ftl2P49945 183 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Kdm4aQ8BW72 1064 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Sik3Q6P4S6 1311 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Atp8b3Q6UQ17 1335 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Timm10P62073 90 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ncoa5Q91W39 579 aaKnown RBP10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Rtkn2Q14B46 604 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Gsdma2Q32M21 443 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Slc38a10Q5I012 1090 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Leo1Q5XJE5 667 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Gnl3lQ6PGG6 577 aaKnown RBP10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 ApobrQ8VBT6 942 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Zbtb1Q91VL9 713 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Lrrfip2Q91WK0 415 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Erc1Q99MI1 1120 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Pus3Q9JI38 481 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Dpf1Q9QX66 387 aa10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Usp42B2RQC2 1324 aaKnown RBP10.91□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Rnf20Q5DTM8 973 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Trim59Q922Y2 403 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Myh15E9Q264 1925 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ly75Q60767 1723 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Prr29B1ARI9 187 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Gpr182P43142 395 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Hspd1P63038 573 aaKnown RBP10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Gimap5Q8BWF2 308 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Atad2Q8CDM1 1040 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Smc4Q8CG47 1286 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 TsksO54887 585 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Zbtb38Q3LR78 1197 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Ppp1r10Q80W00 888 aaKnown RBP10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 SowahdQ8BY98 327 aa10.9□□□□□ -0.66
Ctnna1-201ENSMUST00000042345 Cpa2Q504N0 417 aa10.89□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms