RNA–Protein interactions for RNA: ENSMUST00000034880.9

Stra6-201, Transcript of Receptor for retinol uptake STRA6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stra6, Length 2,993 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6-201ENSMUST00000034880 Abcc4E9Q236 1325 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Cnksr1A2A9K7 700 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Ms4a1P19437 291 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Dhx40Q6PE54 779 aaKnown RBP11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Hnrnpul1Q8VDM6 859 aaKnown RBP11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Bag3Q9JLV1 577 aaKnown RBP11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Znf568E9PYI1 671 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Stat1P42225 749 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Map3k2Q61083 619 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Znf532Q6NXK2 1036 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Zeb2Q9R0G7 1215 aa11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Ahnak2E9PYB0 1738 aaKnown RBP11.93□□□□□ -0.5
Stra6-201ENSMUST00000034880 Hoxa7P02830 229 aa11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Tpm1P58771 284 aa11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Eif4a1P60843 406 aaKnown RBP11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 CemipQ8BI06 1361 aa11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Clec11aO88200 328 aa11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Ddx27Q921N6 760 aaKnown RBP11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Creld2Q9CYA0 350 aa11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Zc3h13E9Q784 1729 aaKnown RBP11.92□□□□□ -0.5
Stra6-201ENSMUST00000034880 Stx1aO35526 288 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Nkx2-3P97334 362 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Kmt5bQ3U8K7 883 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Bicc1Q99MQ1 977 aaKnown RBP11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Echdc1Q9D9V3 322 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Mst1rQ62190 1378 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Dip2bQ3UH60 1574 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Ubr1O70481 1757 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 NalcnQ8BXR5 1738 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Hoxc9P09633 260 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 R3hcc1Q8BSI6 488 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Phf20l1Q8CCJ9 1013 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Atg3Q9CPX6 314 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 AatfQ9JKX4 526 aaKnown RBP11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Trpm3Q5F4S9 1721 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 XpcP51612 930 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Rtel1Q0VGM9 1203 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Rnf20Q5DTM8 973 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Spata32Q8C5V0 334 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Ubxn4Q8VCH8 506 aa11.91□□□□□ -0.5
Stra6-201ENSMUST00000034880 Larp1Q6ZQ58 1072 aaKnown RBP11.9□□□□□ -0.5
Stra6-201ENSMUST00000034880 Snw1Q9CSN1 536 aaKnown RBP11.9□□□□□ -0.5
Stra6-201ENSMUST00000034880 Fam53cQ8BXQ8 393 aa11.9□□□□□ -0.5
Stra6-201ENSMUST00000034880 StrbpQ91WM1 672 aaKnown RBP11.9□□□□□ -0.5
Stra6-201ENSMUST00000034880 Rbm33Q9CXK9 1231 aaKnown RBP11.9□□□□□ -0.5
Stra6-201ENSMUST00000034880 Prr29B1ARI9 187 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Idi1P58044 227 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Paxbp1P58501 919 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Anks1aP59672 1150 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Cct2P80314 535 aaKnown RBP11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Tmem109Q3UBX0 243 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 MlecQ6ZQI3 291 aaKnown RBP11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Ppp1r10Q80W00 888 aaKnown RBP11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Q8BZJ8 459 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Amotl2Q8K371 772 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Pik3c2aQ61194 1686 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Dlg5E9Q9R9 1921 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Chd2E9PZM4 1827 aaKnown RBP11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 AW822073A0A0N4SUK1 652 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Zfp597E9Q6S0 419 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Fez2Q6TYB5 348 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Dnm3Q8BZ98 863 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Pcdhgc5Q91XW9 944 aa11.89□□□□□ -0.51
Stra6-201ENSMUST00000034880 Irgm2A0A140LIF8 407 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Bin1O08539 588 aaKnown RBP11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Xpo4Q9ESJ0 1151 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 CoblQ5NBX1 1337 aaKnown RBP11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Kif2aP28740 705 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Pnpla2Q8BJ56 486 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Mtmr3Q8K296 1196 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Dnaaf4Q8R368 420 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Casz1Q9CWL2 1761 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Ccdc112A0AUP1 442 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Rrp1P56183 494 aaKnown RBP11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Nxf7Q80SZ6 620 aaKnown RBP11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Mei4Q8BRM6 389 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Rassf8Q8CJ96 419 aa11.88□□□□□ -0.51
Stra6-201ENSMUST00000034880 Actn3O88990 900 aaKnown RBP11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 Pde3bQ61409 1100 aa11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 Wdr3Q8BHB4 942 aaKnown RBP11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 H2afxP27661 143 aaKnown RBP11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 Ercc3P49135 783 aa11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 Hps3Q91VB4 1002 aa11.87□□□□□ -0.51
Stra6-201ENSMUST00000034880 Limch1Q3UH68 1057 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Panx2Q6IMP4 677 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Vps18Q8R307 973 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Lrrfip2Q91WK0 415 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Pus3Q9JI38 481 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Neurod6P48986 337 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 RubcnlQ3TD16 648 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Btbd11Q6GQW0 1109 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Spag5Q7TME2 1165 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Gpatch3Q8BIY1 525 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Ints4Q8CIM8 964 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Magi2Q9WVQ1 1275 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 N4bp2F8VQG7 1678 aaKnown RBP11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Aox2Q5SGK3 1345 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Ptpn23Q6PB44 1692 aa11.86□□□□□ -0.51
Stra6-201ENSMUST00000034880 Kiaa0232Q80U59 1396 aaKnown RBP11.85□□□□□ -0.51
Stra6-201ENSMUST00000034880 Nbr1P97432 988 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 81 ms