RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Rps6ka4Q9Z2B9 773 aa27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 Mcm4P49717 862 aa27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 Ftl2P49945 183 aa27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 Ddx46Q569Z5 1032 aaKnown RBP27.65■■■□□ 2.02
Cln6-201ENSMUST00000034776 RubcnlQ3TD16 648 aa27.64■■■□□ 2.02
Cln6-201ENSMUST00000034776 Tti2Q8BGV4 512 aa27.64■■■□□ 2.02
Cln6-201ENSMUST00000034776 Krt25Q8VCW2 446 aa27.64■■■□□ 2.02
Cln6-201ENSMUST00000034776 SnrkQ8VDU5 748 aa27.64■■■□□ 2.02
Cln6-201ENSMUST00000034776 Kdm3aQ6PCM1 1323 aa27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Elmsan1E9Q2I4 1089 aaKnown RBP27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Slc4a1P04919 929 aa27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Atp8a2P98200 1148 aa27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Esco1Q69Z69 843 aa27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Slfnl1Q8BHW9 410 aa27.64■■■□□ 2.01
Cln6-201ENSMUST00000034776 Ugt1a5B2RT14 529 aa27.63■■■□□ 2.01
Cln6-201ENSMUST00000034776 Nek11Q8C0Q4 628 aa27.63■■■□□ 2.01
Cln6-201ENSMUST00000034776 Rufy3Q9D394 469 aa27.63■■■□□ 2.01
Cln6-201ENSMUST00000034776 Bsdc1Q80Y55 427 aa27.62■■■□□ 2.01
Cln6-201ENSMUST00000034776 Rdm1Q9CQK3 281 aa27.62■■■□□ 2.01
Cln6-201ENSMUST00000034776 Rasa1E9PYG6 1038 aa27.62■■■□□ 2.01
Cln6-201ENSMUST00000034776 Gpr182P43142 395 aa27.62■■■□□ 2.01
Cln6-201ENSMUST00000034776 Ppil4Q9CXG3 492 aaKnown RBP27.62■■■□□ 2.01
Cln6-201ENSMUST00000034776 Gm45015A0A140LII9 184 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 Gm18336A0A140LIU8 765 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 1700006A11RikB9EHI3 544 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 4933416C03RikQ3V063 378 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 St18Q80TY4 1045 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 Emilin2Q8K482 1074 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 Cdca7lQ922M5 438 aa27.61■■■□□ 2.01
Cln6-201ENSMUST00000034776 NpeppsQ11011 920 aa27.6■■■□□ 2.01
Cln6-201ENSMUST00000034776 Golim4Q8BXA1 655 aa27.6■■■□□ 2.01
Cln6-201ENSMUST00000034776 Atf7Q8R0S1 413 aa27.6■■■□□ 2.01
Cln6-201ENSMUST00000034776 Mybbp1aQ7TPV4 1344 aaKnown RBP27.6■■■□□ 2.01
Cln6-201ENSMUST00000034776 Zkscan8Q8BSL0 588 aa27.59■■■□□ 2.01
Cln6-201ENSMUST00000034776 Cchcr1Q8K2I2 770 aa27.59■■■□□ 2.01
Cln6-201ENSMUST00000034776 Q9D9S1 216 aa27.59■■■□□ 2.01
Cln6-201ENSMUST00000034776 Slf2Q6P9P0 1278 aa27.59■■■□□ 2.01
Cln6-201ENSMUST00000034776 Rnf20Q5DTM8 973 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Cyp7a1Q64505 503 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Sp8Q8BMJ8 486 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Mb21d2Q8C525 428 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Polr3dQ91WD1 398 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Lama4P97927 1816 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 TsksO54887 585 aa27.58■■■□□ 2.01
Cln6-201ENSMUST00000034776 Npc1l1Q6T3U4 1333 aa27.57■■■□□ 2
Cln6-201ENSMUST00000034776 Trim34bJ3QNR8 485 aa27.57■■■□□ 2
Cln6-201ENSMUST00000034776 InhbeO08717 350 aa27.57■■■□□ 2
Cln6-201ENSMUST00000034776 Erc1Q99MI1 1120 aa27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Hmg20bQ9Z104 317 aa27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Anxa1P10107 346 aaKnown RBP27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Syt1P46096 421 aa27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Susd4Q8BH32 490 aa27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Rtn4Q99P72 1162 aaKnown RBP27.56■■■□□ 2
Cln6-201ENSMUST00000034776 Cyp2d10P24456 504 aa27.55■■■□□ 2
Cln6-201ENSMUST00000034776 Itga6Q61739 1091 aa27.55■■■□□ 2
Cln6-201ENSMUST00000034776 Pof1bQ8K4L4 587 aa27.55■■■□□ 2
Cln6-201ENSMUST00000034776 Trim34aQ99PP6 485 aa27.55■■■□□ 2
Cln6-201ENSMUST00000034776 Psma5Q9Z2U1 241 aaKnown RBP27.55■■■□□ 2
Cln6-201ENSMUST00000034776 Pus3Q9JI38 481 aa27.55■■■□□ 2
Cln6-201ENSMUST00000034776 SowahdQ8BY98 327 aa27.54■■■□□ 2
Cln6-201ENSMUST00000034776 Cyp3a57D3YYZ0 503 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Fam84aQ9D650 292 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Kcnq5Q9JK45 933 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 TnksQ6PFX9 1320 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Slc38a10Q5I012 1090 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Trip6Q9Z1Y4 480 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Lrp5Q91VN0 1614 aa27.53■■■□□ 2
Cln6-201ENSMUST00000034776 Pkp1P97350 728 aaKnown RBP27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Ccne2Q9Z238 404 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Fbxl16A2RT62 479 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Bin2D3Z6Q9 489 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Spryd3E9Q9B3 442 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Atp2b3Q0VF55 1220 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Kank4Q6P9J5 1016 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Usp44Q8C2S0 711 aa27.52■■■□□ 2
Cln6-201ENSMUST00000034776 Ltbp1Q8CG19 1712 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 GakQ99KY4 1305 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 Bicdl1A0JNT9 577 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 F2rP30558 430 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 Ifit1bl2Q3U687 466 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 Rab3gap1Q80UJ7 981 aa27.51■■□□□ 1.99
Cln6-201ENSMUST00000034776 Ltv1Q6NSQ7 470 aaKnown RBP27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Dctn1O08788 1281 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Snai1Q02085 264 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Znf692Q3U381 531 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Rps6kb1Q8BSK8 525 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Mrpl50Q8VDT9 159 aaKnown RBP27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Lrrfip2Q91WK0 415 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Ppp4r3bQ922R5 820 aa27.5■■□□□ 1.99
Cln6-201ENSMUST00000034776 Plbd2Q3TCN2 594 aa27.49■■□□□ 1.99
Cln6-201ENSMUST00000034776 Sgsm1Q8BPQ7 1093 aa27.49■■□□□ 1.99
Cln6-201ENSMUST00000034776 Fbxo3Q9DC63 480 aa27.49■■□□□ 1.99
Cln6-201ENSMUST00000034776 Pde8bE9Q4S1 865 aa27.49■■□□□ 1.99
Cln6-201ENSMUST00000034776 Ttc14Q9CSP9 761 aa27.49■■□□□ 1.99
Cln6-201ENSMUST00000034776 4931408C20RikE9PWP9 1381 aa27.48■■□□□ 1.99
Cln6-201ENSMUST00000034776 Plekhf1Q3TB82 279 aa27.48■■□□□ 1.99
Cln6-201ENSMUST00000034776 Plcd4Q8K3R3 807 aa27.48■■□□□ 1.99
Cln6-201ENSMUST00000034776 Sema6bO54951 886 aa27.47■■□□□ 1.99
Cln6-201ENSMUST00000034776 MypopQ8R4U1 393 aa27.47■■□□□ 1.99
Cln6-201ENSMUST00000034776 Rtkn2Q14B46 604 aa27.47■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms