RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Ano10Q8BH79 659 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Pnma3Q8JZW8 466 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Ankrd50F7BE84 1390 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Kiaa1107Q80TK0 1369 aa12.4□□□□□ -0.42
Rnf40-201ENSMUST00000033088 Abcd1P48410 736 aa12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Mex3cQ05A36 652 aaKnown RBP12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Arglu1Q3UL36 271 aaKnown RBP12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Hspa4Q61316 841 aa12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Znf532Q6NXK2 1036 aa12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Vps16Q920Q4 839 aa12.4□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Evi5P97366 809 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Cfap157Q0VFX2 523 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Mx2Q9WVP9 655 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Nwd1A6H603 1563 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Diaph1O08808 1255 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Capza3P70190 299 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Map9Q3TRR0 646 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Znf697Q569E7 569 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Gdap1l1Q8VE33 370 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Zkscan5Q9Z1D8 819 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 NktrP30415 1453 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Cps1Q8C196 1500 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Tmem67Q8BR76 992 aa12.39□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Adgrl1Q80TR1 1466 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Igflr1Q3U4N7 345 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Dnajc14Q921R4 703 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Mum1Q6DID5 682 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ccdc158Q8CDI6 1109 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 PhaxQ9JJT9 385 aaKnown RBP12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Scaf11E9PZM7 1456 aaKnown RBP12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Cd22P35329 862 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Agtpbp1Q641K1 1218 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Fam76aQ922G2 307 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Bloc1s2Q9CWG9 143 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Lmtk3Q5XJV6 1424 aa12.38□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Lcmt1A0A0U1RNF2 332 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Stx1aO35526 288 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Tshz2Q68FE9 1030 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Lmbrd2Q8C561 694 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Zrsr2Q62377 462 aaKnown RBP12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ccdc57Q6PHN1 1016 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 HypkQ9CR41 129 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 LratQ9JI60 231 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Tmem132eQ6IEE6 982 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Klhl10Q9D5V2 608 aa12.37□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Golim4Q8BXA1 655 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ccdc96Q9CR92 584 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Desi2Q9D291 194 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Chaf1aQ9QWF0 911 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Chmp7Q8R1T1 451 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Map3k19E9Q3S4 1311 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 GpkowQ56A08 488 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Idi2Q8BFZ6 227 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Rassf4Q8CB96 322 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 TatQ8QZR1 454 aa12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ipo7Q9EPL8 1038 aaKnown RBP12.36□□□□□ -0.43
Rnf40-201ENSMUST00000033088 RalylQ8BTF8 293 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ttc19Q8CC21 365 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ccdc73Q8CDM4 1066 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Evc2Q8K1G2 1220 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Lrrc2Q8VDB8 371 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Bag3Q9JLV1 577 aaKnown RBP12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 IbtkQ6ZPR6 1352 aaKnown RBP12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Lnx1O70263 728 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Fchsd2Q3USJ8 740 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Tnni2P13412 182 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Stat1P42225 749 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Rtel1Q0VGM9 1203 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Q3UJC8 639 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Aldh8a1Q8BH00 487 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Fsd2Q8BZ52 692 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ccdc83Q9D4V3 305 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Arap3Q8R5G7 1538 aa12.35□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ppfia1B2RXQ2 1266 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Vps53Q8CCB4 832 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Nat10Q8K224 1024 aaKnown RBP12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Iqca1Q9CUL5 857 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Odf2lQ9D478 642 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Jakmip2D3YXK0 820 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Pde6bP23440 856 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Ifit2Q64112 472 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 IncenpQ9WU62 880 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Limch1Q3UH68 1057 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Dnaaf4Q8R368 420 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Sirt1Q923E4 737 aa12.34□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Smarcc1P97496 1104 aa12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Utp18Q5SSI6 552 aaKnown RBP12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 TfrcQ62351 763 aaKnown RBP12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Me3Q8BMF3 604 aa12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 OptnQ8K3K8 584 aa12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Nlrp3Q8R4B8 1033 aa12.33□□□□□ -0.43
Rnf40-201ENSMUST00000033088 Fam135bQ9DAI6 1403 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Sstr3P30935 428 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Klhl30Q8C3F7 581 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Rufy2Q8R4C2 606 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Rufy3Q9D394 469 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ak2Q9WTP6 239 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Elp1Q7TT37 1333 aaKnown RBP12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Ets1P27577 440 aa12.33□□□□□ -0.44
Rnf40-201ENSMUST00000033088 Wdr93Q402B2 695 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms