RNA–Protein interactions for RNA: ENSMUST00000029421.5

Ptx3-201, Transcript of Pentraxin-related protein PTX3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptx3, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3-201ENSMUST00000029421 Stk3Q9JI10 497 aa26.56■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Nlrp1aQ2LKU9 1182 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Atg9aQ68FE2 551 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Esco1Q69Z69 843 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 GptQ8QZR5 496 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 SrrtQ99MR6 875 aaKnown RBP26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Bicdl1A0JNT9 577 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Phactr2B1AVP0 632 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Syce3B5KM66 88 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Plcb3P51432 1234 aaKnown RBP26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Zbtb45Q52KG4 520 aa26.55■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Neurod6P48986 337 aa26.54■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Tbc1d4Q8BYJ6 1307 aa26.54■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Ms4a2P20490 235 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Gse1Q3U3C9 1213 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Rbm27Q5SFM8 1060 aaKnown RBP26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Rcan3Q9JKK0 239 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 DmtnQ9WV69 405 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Rad50P70388 1312 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 EspnlQ3UYR4 1005 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Taok3Q8BYC6 898 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Tmc2Q8R4P4 888 aa26.53■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Casz1Q9CWL2 1761 aa26.52■■□□□ 1.84
Ptx3-201ENSMUST00000029421 DbnlQ62418 436 aa26.52■■□□□ 1.84
Ptx3-201ENSMUST00000029421 Cops6O88545 324 aa26.51■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Pmfbp1Q9WVQ0 1022 aa26.51■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Eya2O08575 532 aa26.51■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Pdzrn3Q69ZS0 1063 aa26.51■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Greb1lB9EJV3 1913 aa26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Ppfibp2O35711 882 aa26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Slf2Q6P9P0 1278 aa26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Afg3l2Q8JZQ2 802 aaKnown RBP26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Cchcr1Q8K2I2 770 aa26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Chmp3Q9CQ10 224 aa26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Rrs1Q9CYH6 365 aaKnown RBP26.5■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Ankrd31A0A140LI88 1765 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 1700006A11RikB9EHI3 544 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Nol10Q5RJG1 687 aaKnown RBP26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 NfkbibQ60778 359 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Tbc1d30Q69ZT9 766 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Jakmip1Q8BVL9 626 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Kiaa0319lQ8K135 1048 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Ciao1Q99KN2 339 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Foxo4Q9WVH3 505 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 BcanQ61361 883 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Cypt2Q6P924 180 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Lrit1Q8K099 624 aa26.49■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Smarcc1P97496 1104 aa26.48■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Zcrb1Q9CZ96 217 aaKnown RBP26.48■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Nphp3Q7TNH6 1325 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Lama4P97927 1816 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Gadd45bP22339 160 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Fnbp4Q6ZQ03 1031 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Fam102bQ8BQS4 339 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Ccar2Q8VDP4 922 aaKnown RBP26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Il1rapl2Q9ERS6 686 aa26.47■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Myh1Q5SX40 1942 aa26.46■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Zbtb38Q3LR78 1197 aa26.46■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Casc1Q6TDU8 730 aa26.46■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Rhot2Q8JZN7 620 aa26.46■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Trip6Q9Z1Y4 480 aa26.46■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Zscan25B2RX31 543 aa26.45■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Wdr93Q402B2 695 aa26.45■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Med4Q9CQA5 270 aa26.45■■□□□ 1.83
Ptx3-201ENSMUST00000029421 Ppfia1B2RXQ2 1266 aa26.45■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Trim34aQ99PP6 485 aa26.45■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Ifit1bl2Q3U687 466 aa26.44■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Susd4Q8BH32 490 aa26.44■■□□□ 1.82
Ptx3-201ENSMUST00000029421 SowahdQ8BY98 327 aa26.44■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Mybbp1aQ7TPV4 1344 aaKnown RBP26.44■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Gm13023A2A8N2 498 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Cyp7a1Q64505 503 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Anp32cQ64G17 123 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Ncoa5Q91W39 579 aaKnown RBP26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Arhgap33Q80YF9 1305 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Elmsan1E9Q2I4 1089 aaKnown RBP26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Timm10P62073 90 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Snai1Q02085 264 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Gsdma2Q32M21 443 aa26.42■■□□□ 1.82
Ptx3-201ENSMUST00000029421 C4bP01029 1738 aa26.41■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Ube2hP62257 183 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Rtn4Q99P72 1162 aaKnown RBP26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Slx4ipQ9D7Y9 413 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Klhl34A2AI76 644 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Trim34bJ3QNR8 485 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Dctn1O08788 1281 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Ftl2P49945 183 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Lrrc43Q3V0L5 667 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Dpf1Q9QX66 387 aa26.4■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Gjb2Q00977 226 aa26.39■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Q8BT18 775 aa26.39■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Tshz3Q8CGV9 1081 aa26.39■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Top1mtQ8R4U6 593 aa26.39■■□□□ 1.82
Ptx3-201ENSMUST00000029421 NgdnQ9DB96 315 aaKnown RBP26.39■■□□□ 1.82
Ptx3-201ENSMUST00000029421 Tbc1d31Q6NXY1 996 aa26.38■■□□□ 1.81
Ptx3-201ENSMUST00000029421 Mlh1Q9JK91 760 aa26.38■■□□□ 1.81
Ptx3-201ENSMUST00000029421 Col22a1E9Q7P1 1613 aa26.38■■□□□ 1.81
Ptx3-201ENSMUST00000029421 Rbbp8nlA2ABX0 614 aa26.38■■□□□ 1.81
Ptx3-201ENSMUST00000029421 NcapgE9PWG6 1004 aa26.38■■□□□ 1.81
Ptx3-201ENSMUST00000029421 EzrP26040 586 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms