RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Dhx9O70133 1380 aaKnown RBP10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Akap12Q9WTQ5 1684 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 AU019823E9PUQ3 292 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ints3Q7TPD0 1041 aaKnown RBP10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Maco1Q7TQE6 664 aaKnown RBP10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Zkscan3Q91VW9 553 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Sf3a3Q9D554 501 aaKnown RBP10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Efcab6Q6P1E8 1516 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Rtf1A2AQ19 715 aaKnown RBP10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ppfibp2O35711 882 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Sema3fO88632 785 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ms4a1P19437 291 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Zfyve27Q3TXX3 415 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc66Q6NS45 935 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Kdm4cQ8VCD7 1054 aa10.67□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc171E9Q1U1 1324 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ttc41Q692V3 1318 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Apaf1O88879 1249 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Adcy2Q80TL1 1090 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Anapc4Q91W96 807 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Eif3aP23116 1344 aaKnown RBP10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Wdr63B2RY71 923 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Zfp651E9PZ11 729 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 RpsaP14206 295 aaKnown RBP10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ddx17Q501J6 650 aaKnown RBP10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Fan1Q69ZT1 1020 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Oxsr1Q6P9R2 527 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Psmd6Q99JI4 389 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Trim42Q9D2H5 723 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Riok3Q9DBU3 519 aaKnown RBP10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 CarsQ9ER72 831 aaKnown RBP10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Lrrc23O35125 340 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ap1g2O88512 791 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ap5z1Q3U829 807 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gngt1Q61012 74 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Q66JV7 365 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Tshz3Q8CGV9 1081 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Inpp5bQ8K337 993 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Nrxn3Q6P9K9 1571 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Atp7aQ64430 1491 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Abca17E9PX95 1733 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 1700006A11RikB9EHI3 544 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc152E9PX14 254 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Cacna2d1O08532 1103 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Mmp14P53690 582 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc148Q6P5U8 527 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Efcab8Q8C9R9 203 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Fbxo18Q8K2I9 1042 aa10.66□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Mpp4Q6P7F1 635 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ddx54Q8K4L0 874 aaKnown RBP10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Myo5cE9Q1F5 1742 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Rfx7F8VPJ6 1459 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Brpf3B2KF05 1204 aaKnown RBP10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gm20521D3Z5F7 333 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Bin1O08539 588 aaKnown RBP10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Ccdc162pQ0VG85 912 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Spata32Q8C5V0 334 aa10.65□□□□□ -0.7
Ctc1-201ENSMUST00000021278 Gm45015A0A140LII9 184 aa10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Lrrc6O88978 473 aa10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Kcnf1Q7TSH7 493 aa10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Arid5bQ8BM75 1188 aaKnown RBP10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Osbpl1aQ91XL9 950 aa10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Krt85Q9Z2T6 507 aa10.65□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Gas2l2Q5SSG4 860 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Ccdc130Q9D516 385 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 2310002L09RikQ9D7L5 217 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Stx6Q9JKK1 255 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Agtpbp1Q641K1 1218 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Zcwpw1Q6IR42 630 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 HomezQ80W88 542 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Ano10Q8BH79 659 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Eif2b5Q8CHW4 717 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 MrgbpQ9DAT2 204 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Pdzrn4E9PUZ9 1014 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Hnrnph1O35737 449 aaKnown RBP10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Rab3gap1Q80UJ7 981 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Erc1Q99MI1 1120 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Hip1rQ9JKY5 1068 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Phlpp1Q8CHE4 1687 aa10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Iqgap1Q9JKF1 1657 aaKnown RBP10.64□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Eftud2O08810 971 aaKnown RBP10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Stkld1Q80YS9 662 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Gm10563F6WIE4 79 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Tpp2Q64514 1262 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Ankrd49Q8VE42 238 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Sept14Q9DA97 430 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Tsen2Q6P7W5 460 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Skor1Q8BX46 964 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Smarca5Q91ZW3 1051 aaKnown RBP10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Mrfap1Q9CQL7 125 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Ccdc47Q9D024 483 aaKnown RBP10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 ChmQ9QXG2 665 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Cyp46a1Q9WVK8 500 aa10.63□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Ppp1r12cQ3UMT1 782 aa10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Thoc1Q8R3N6 657 aaKnown RBP10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Lmbr1Q9JIT0 490 aa10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Kif9Q9WV04 790 aa10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Asxl1P59598 1514 aa10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Tns3Q5SSZ5 1440 aa10.62□□□□□ -0.71
Ctc1-201ENSMUST00000021278 Fbf1A2A870 1173 aa10.62□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms