RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Mctp1E9PV86 951 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 IbspQ61711 324 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 TnmdQ9EP64 317 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 TefQ9JLC6 301 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ccdc162pQ0VG85 912 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Zfp317Q8C0Q5 607 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ddx60E9PZQ1 1711 aa13.44□□□□□ -0.26
Vps54-201ENSMUST00000006221 Gm21698A0A087WQP8 267 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Gm21671G3UY31 267 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Prl7a2O54831 253 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 EzrP26040 586 aaKnown RBP13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Lmbrd2Q8C561 694 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Iffo2Q8R2V2 512 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Irgm2A0A140LIF8 407 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Cyp2d10P24456 504 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Stat1P42225 749 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Mb21d2Q8C525 428 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Gys2Q8VCB3 704 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Timm10P62073 90 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ccdc129Q14B48 1034 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Rhot2Q8JZN7 620 aa13.43□□□□□ -0.26
Vps54-201ENSMUST00000006221 Krt85Q9Z2T6 507 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Lmtk3Q5XJV6 1424 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 1700113H08RikE9Q9Q5 327 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Nek11Q8C0Q4 628 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Rassf8Q8CJ96 419 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Grpel1Q99LP6 217 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Siglec1Q62230 1695 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Bicd2Q921C5 820 aa13.42□□□□□ -0.26
Vps54-201ENSMUST00000006221 Atp8b3Q6UQ17 1335 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Usp28Q5I043 1051 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Farp2Q91VS8 1065 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ano6Q6P9J9 911 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Golim4Q8BXA1 655 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Rrs1Q9CYH6 365 aaKnown RBP13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Hmg20bQ9Z104 317 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Col4a1P02463 1669 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Cct2P80314 535 aaKnown RBP13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ppp1r10Q80W00 888 aaKnown RBP13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Srgap1Q91Z69 1062 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Tbc1d8Q9Z1A9 1134 aa13.41□□□□□ -0.26
Vps54-201ENSMUST00000006221 Nxf2Q4ZGD8 691 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Fkbp5Q64378 456 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ltv1Q6NSQ7 470 aaKnown RBP13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Topaz1E5FYH1 1653 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Thsd7aQ69ZU6 1645 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Cfap157Q0VFX2 523 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Tmem87bQ8BKU8 555 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Usp44Q8C2S0 711 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Sh3bp5Q9Z131 463 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Tjp1P39447 1745 aaKnown RBP13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Nxf7Q80SZ6 620 aaKnown RBP13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Ptcd1Q8C2E4 695 aaKnown RBP13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Rimbp3Q3V0F0 1606 aa13.4□□□□□ -0.26
Vps54-201ENSMUST00000006221 Csrnp1P59054 583 aa13.4□□□□□ -0.27
Vps54-201ENSMUST00000006221 CrebrfQ8CDG5 640 aaKnown RBP13.4□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ccdc158Q8CDI6 1109 aa13.4□□□□□ -0.27
Vps54-201ENSMUST00000006221 Pcdhb15Q91Y04 786 aa13.4□□□□□ -0.27
Vps54-201ENSMUST00000006221 Sh3bgrQ9WUZ7 214 aa13.4□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ttc27Q8CD92 847 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tns2Q8CGB6 1400 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Cyp2d34L7N463 504 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Nucb2P81117 420 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Bcl9Q9D219 1425 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Zpr1Q62384 459 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 PhaxQ9JJT9 385 aaKnown RBP13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Syde2E9PUP1 1314 aa13.39□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gnat3Q3V3I2 354 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Atg9aQ68FE2 551 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Rab3gap1Q80UJ7 981 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Efcab2Q9CQ46 164 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Sult6b1P0CC03 303 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Rbm17Q8JZX4 405 aaKnown RBP13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Bmp2kQ91Z96 1138 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Ythdc1E9Q5K9 736 aaKnown RBP13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Atp1a3Q6PIC6 1013 aa13.38□□□□□ -0.27
Vps54-201ENSMUST00000006221 Klhl34A2AI76 644 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Kif3aP28741 701 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Trim56Q80VI1 734 aaKnown RBP13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Arid5bQ8BM75 1188 aaKnown RBP13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tbc1d4Q8BYJ6 1307 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 MsnP26041 577 aaKnown RBP13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tsen34Q8BMZ5 316 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Kcnq3Q8K3F6 873 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Aox4Q3TYQ9 1336 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Tpd52l1O54818 204 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Nom1Q3UFM5 854 aaKnown RBP13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Plcd3Q8K2J0 785 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Shank2Q80Z38 1476 aa13.37□□□□□ -0.27
Vps54-201ENSMUST00000006221 Oas2E9Q9A9 742 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 ZyxQ62523 564 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Chmp3Q9CQ10 224 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Cnpy2Q9QXT0 182 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 RgmbQ7TQ33 436 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm21663A0A0G2JE01 267 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm7361D3Z6R1 267 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 5031410I06RikE9Q4E0 267 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm1979E9QAN3 267 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm5862K7N5V5 267 aa13.36□□□□□ -0.27
Vps54-201ENSMUST00000006221 Gm10220K7N660 267 aa13.36□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms