RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Pim2Q62070 370 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Sgsm2Q80U12 1005 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Q9D9S1 216 aa13.56□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Col22a1E9Q7P1 1613 aa13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 C4bP01029 1738 aa13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Pdcl2Q78Y63 240 aa13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rcan3Q9JKK0 239 aa13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Bag3Q9JLV1 577 aaKnown RBP13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Sipa1l3G3X9J0 1776 aa13.55□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rbm8a2A0A0N4SUH6 174 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 GapdhsQ64467 440 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Nlrp9bQ66X22 1003 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Bms1Q6PGF5 1284 aaKnown RBP13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ubxn10Q8BG34 277 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rhot2Q8JZN7 620 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Edc3Q8K2D3 508 aaKnown RBP13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Slc26a8Q8R0C3 999 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 SnrkQ8VDU5 748 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rbm8aQ9CWZ3 174 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ak2Q9WTP6 239 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ets1P27577 440 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Nol12Q8BG17 217 aa13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 CoblQ5NBX1 1337 aaKnown RBP13.54□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Zbtb45Q52KG4 520 aa13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rbm27Q5SFM8 1060 aaKnown RBP13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rapgef4Q9EQZ6 1011 aa13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Il1rapl2Q9ERS6 686 aa13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Tbc1d4Q8BYJ6 1307 aa13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ank1Q02357 1862 aa13.53□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Zscan25B2RX31 543 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ccdc6D3YZP9 469 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Zbtb40Q6PCS8 1258 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Rnf214Q8BFU3 668 aaKnown RBP13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Cdca7lQ922M5 438 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 MypnQ5DTJ9 1315 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 InsrrQ9WTL4 1300 aa13.52□□□□□ -0.24
Ddx56-201ENSMUST00000004507 Ube2hP62257 183 aa13.52□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Tbc1d30Q69ZT9 766 aa13.52□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Casc1Q6TDU8 730 aa13.52□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Prr5lA2AVJ5 370 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Tmem87bQ8BKU8 555 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 E4f1Q8CCE9 783 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Med4Q9CQA5 270 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ush1cQ9ES64 910 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Psma5Q9Z2U1 241 aaKnown RBP13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Rnf20Q5DTM8 973 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Adam1aQ60813 791 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Gnl3lQ6PGG6 577 aaKnown RBP13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ccdc178Q8CDV0 866 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Atf7Q8R0S1 413 aa13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 SrrtQ99MR6 875 aaKnown RBP13.51□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Fam184aE9PW83 1143 aa13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 MecomP14404 1042 aa13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 F2rP30558 430 aa13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Pkp1P97350 728 aaKnown RBP13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Lama4P97927 1816 aa13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 DpydQ8CHR6 1025 aa13.5□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Aox1O54754 1333 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ccdc173A0JLY1 547 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Mdm2P23804 489 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Lrrc43Q3V0L5 667 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 GpkowQ56A08 488 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ripor2Q80U16 1078 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 4930504O13RikQ8C5Z9 145 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 NaspQ99MD9 773 aaKnown RBP13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Trip6Q9Z1Y4 480 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ugt1a5B2RT14 529 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Eef2kO08796 724 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Becn1O88597 448 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Adora1Q60612 326 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Fkbp5Q64378 456 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ddx58Q6Q899 926 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ankib1Q6ZPS6 1085 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Nlrp3Q8R4B8 1033 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Mrpl50Q8VDT9 159 aaKnown RBP13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Polr3dQ91WD1 398 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Chd1lQ9CXF7 900 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 PhaxQ9JJT9 385 aaKnown RBP13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Hmg20bQ9Z104 317 aa13.49□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Tpm2P58774 284 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 RubcnlQ3TD16 648 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Esco1Q69Z69 843 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Slf2Q6P9P0 1278 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Zscan22Q8BGS5 496 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Sp8Q8BMJ8 486 aa13.48□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ssc5dQ8BV57 1371 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Apba2P98084 750 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Usp48Q3V0C5 1052 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Samm50Q8BGH2 469 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Rps6kb1Q8BSK8 525 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 RtcbQ99LF4 505 aaKnown RBP13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ltb4r2Q9JJL9 360 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Igbp1bQ9QZ29 343 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Hmgb2P30681 210 aaKnown RBP13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Atp1b3P97370 278 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Gnat3Q3V3I2 354 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 DbnlQ62418 436 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Olfml1Q8BSH2 233 aa13.47□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Ubr3Q5U430 1889 aa13.46□□□□□ -0.25
Ddx56-201ENSMUST00000004507 Prr29B1ARI9 187 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms