RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 VeztQ3ZK22 780 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ccdc82Q6PG04 518 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Plcd1Q8R3B1 756 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Gys2Q8VCB3 704 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Abca8aQ8K442 1620 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Prl7a2O54831 253 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ccp110Q7TSH4 1004 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Plcd3Q8K2J0 785 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 PtpruB1AUH1 1446 aa11.04□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Zscan29E9Q5B4 869 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ccdc162pQ0VG85 912 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ddx17Q501J6 650 aaKnown RBP11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Trim25Q61510 634 aaKnown RBP11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cep135Q6P5D4 1140 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Krt25Q8VCW2 446 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Tmem132aQ922P8 1018 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cwc25Q9DBF7 416 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ercc6l2Q9JIM3 1537 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ttll7A4Q9F0 912 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Mns1Q61884 491 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Krt82Q99M74 516 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Kiaa0556Q8C753 1610 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Lekr1B2RVN1 116 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 TrhQ62361 256 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 ImmtQ8CAQ8 757 aaKnown RBP11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Tmc2Q8R4P4 888 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Pdzd9Q9D9M4 266 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Myom1Q62234 1667 aaKnown RBP11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ms4a2P20490 235 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Cyp2d11P24457 504 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Anp32eP97822 260 aaKnown RBP11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Ano10Q8BH79 659 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Nrbp1Q99J45 535 aa11.03□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Tecpr2Q3UH45 1423 aa11.02□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Abca17E9PX95 1733 aa11.02□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Znf653Q6YND2 615 aa11.02□□□□□ -0.64
Col6a1-201ENSMUST00000001147 ApobrQ8VBT6 942 aa11.02□□□□□ -0.64
Col6a1-201ENSMUST00000001147 DnmbpQ6TXD4 1580 aa11.02□□□□□ -0.64
Col6a1-201ENSMUST00000001147 Oas2E9Q9A9 742 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tnni2P13412 182 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ccdc102aQ3TMW1 549 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Sil1Q9EPK6 465 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Zfp251Q6PCX8 632 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ddx54Q8K4L0 874 aaKnown RBP11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 PigbQ9JJQ0 542 aa11.02□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Zfp804bA0A0G2JGH6 1343 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 IghaA0A0A6YXW6 389 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tpm1P58771 284 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tmx1Q8VBT0 278 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Akap12Q9WTQ5 1684 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Bag1Q60739 355 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 DymQ8CHY3 669 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Rbm42Q91V81 474 aaKnown RBP11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 U2af2P26369 475 aaKnown RBP11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Irf5P56477 497 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Lamb3Q61087 1168 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Dnaaf4Q8R368 420 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Pus3Q9JI38 481 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Nfe2l3Q9WTM4 660 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Spata31d1bE9QA57 1361 aa11.01□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ttc37F8VPK0 1563 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Brpf3B2KF05 1204 aaKnown RBP11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Fam228bQ497Q6 232 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Dis3l2Q8CI75 870 aaKnown RBP11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ccdc94Q9D6J3 314 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 SelenooQ9DBC0 667 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Atp8b3Q6UQ17 1335 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Plekhd1B2RPU2 505 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Dnm1P39053 867 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 TbcaP48428 108 aaKnown RBP11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Frat1P70339 274 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Mx2Q9WVP9 655 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ehbp1l1Q99MS7 1716 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Fndc1E9Q043 1732 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Lnx1O70263 728 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 CrklP47941 303 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Nom1Q3UFM5 854 aaKnown RBP11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Dusp9Q7TNL7 452 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Cep120Q7TSG1 988 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Tmco3Q8BH01 678 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Lmod1Q8BVA4 595 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Mknk2Q8CDB0 459 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ddx27Q921N6 760 aaKnown RBP11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Phkg2Q9DB30 406 aa11□□□□□ -0.65
Col6a1-201ENSMUST00000001147 AcrbpQ3V140 540 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Zkscan4Q5SZT6 480 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 DbnlQ62418 436 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Krt84Q99M73 603 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 1700006A11RikB9EHI3 544 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Ces1hD3Z298 562 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Zfp113Q8C689 439 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Aox1O54754 1333 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Adam1aQ60813 791 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Rab3gap1Q80UJ7 981 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Lrrc2Q8VDB8 371 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Terf2ipQ91VL8 393 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Snw1Q9CSN1 536 aaKnown RBP10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Abcc4E9Q236 1325 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Sult6b1P0CC03 303 aa10.99□□□□□ -0.65
Col6a1-201ENSMUST00000001147 Cnot6lQ8VEG6 555 aa10.99□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 42.1 ms