RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 CECR9P0C854 216 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 RYKP34925 604 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 HBA1P69905 142 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 PAQR6Q6TCH4 344 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 USP43Q70EL4 1123 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 OR4F15Q8NGB8 312 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 OR1K1Q8NGR3 316 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 UBASH3BQ8TF42 649 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 WDR60Q8WVS4 1066 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 OIT3Q8WWZ8 545 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 IFT81Q8WYA0 676 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 BCL2L2Q92843 193 aaPredicted RBP17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 ZNF385AQ96PM9 386 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 KCNS3Q9BQ31 491 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 ZNF442Q9H7R0 627 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 SEC61A2Q9H9S3 476 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 TMEM45AQ9NWC5 275 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 SLC35A3Q9Y2D2 325 aa17.11■□□□□ 0.33
RABGGTA-214ENST00000560163 ARPC4-TTLL3A0A0A6YYG9 625 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 A0A1W2PPM1 405 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 LYNX1G3V0Z9 82 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 hCG_2039718K7EN88 272 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 ZNF208O43345 1280 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 PLIN3O60664 434 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 LYNX1P0DP58 116 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 IFNGR1P15260 489 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 MATN1P21941 496 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 THBS4P35443 961 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 SLC1A3P43003 542 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 ARFIP2P53365 341 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 HILS1P60008 231 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 CCNIQ14094 377 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 PTGR1Q14914 329 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 PRR31Q5SQ13 230 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 C6orf120Q7Z4R8 191 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 PEG10Q86TG7 708 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 GLCCI1Q86VQ1 547 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 RIMKLAQ8IXN7 391 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 FAM169BQ8N8A8 192 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 ZG16BQ96DA0 208 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 AURKBQ96GD4 344 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 NAA11Q9BSU3 229 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 GIMAP2Q9UG22 337 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 PCDHGB4Q9UN71 923 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 FIS1Q9Y3D6 152 aa17.1■□□□□ 0.33
RABGGTA-214ENST00000560163 TMED7-TICAM2A0A0A6YYA0 188 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 TMEM114B3SHH9 223 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 NR5A2O00482 541 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 GLRA3O75311 464 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 IGKV3-15P01624 115 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 FGF4P08620 206 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 CCNA2P20248 432 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 TYW3Q6IPR3 259 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 AAED1Q7RTV5 226 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 SVOPLQ8N434 492 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 KRTCAP2Q8N6L1 136 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 OR9K2Q8NGE7 335 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 MAGEE2Q8TD90 523 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 ZNF418Q8TF45 676 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 PMM1Q92871 262 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 TMEM186Q96B77 213 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 SF3B5Q9BWJ5 86 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 RACGAP1Q9H0H5 632 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 NELFAQ9H3P2 528 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 PIF1Q9H611 641 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 ATAD3AQ9NVI7 634 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 OSGIN1Q9UJX0 560 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 PCDHB10Q9UN67 800 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 TMED7Q9Y3B3 224 aa17.09■□□□□ 0.33
RABGGTA-214ENST00000560163 TMEM72A0PK05 275 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 ZC3H12DA2A288 527 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 LGI1O95970 557 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 ERCC1P07992 297 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 CPA3P15088 417 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 NPR2P20594 1047 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 HTR3AP46098 478 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 IDH2P48735 452 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 ADRM1Q16186 407 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 CCDC153Q494R4 210 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 LINGO2Q7L985 606 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 ABHD12BQ7Z5M8 362 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 MYPOPQ86VE0 399 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 CLEC4FQ8N1N0 589 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 TMEM99Q8N816 258 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 MIPOL1Q8TD10 442 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 DDIT4LQ96D03 193 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 ZNF317Q96PQ6 595 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 HIF1ANQ9NWT6 349 aa17.08■□□□□ 0.32
RABGGTA-214ENST00000560163 CLDN24A6NM45 220 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 TMEM233B4DJY2 109 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 RGS9O75916 674 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 CHEK2O96017 543 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 TUBA1BP68363 451 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 TUBA4AP68366 448 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 POU3F1Q03052 451 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 ATP6AP1LQ52LC2 224 aa17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 PDLIM3Q53GG5 364 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-214ENST00000560163 OTUD3Q5T2D3 398 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms