RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 BRF2Q9HAW0 419 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 EMC7Q9NPA0 242 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 MCM8Q9UJA3 840 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 GRIP1Q9Y3R0 1128 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 SPEF1Q9Y4P9 236 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 HEATR5AQ86XA9 2040 aa4.19□□□□□ -1.74
ATXN3-229ENST00000554672 A0A1W2PR80 420 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GXYLT2A0PJZ3 443 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GAGE12BA1L429 117 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GAGE12HA6NDE8 117 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 CXorf49A8MYA2 514 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 E7ESA3 106 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 KIF2AO00139 706 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PGRMC1O00264 195 aaKnown RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 UPK1AO00322 258 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 RAD51DO75771 328 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PSMG1O95456 288 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 OXSR1O95747 527 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PDYNP01213 254 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 IGKV1D-16P01601 117 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ERCC1P07992 297 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 IL3P08700 152 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 HKR1P10072 659 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 HPGDP15428 266 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PGCP20142 388 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 EDNRAP25101 427 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SLC7A1P30825 629 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 LCN1P31025 176 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 KHKP50053 298 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 IDH3GP51553 393 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 NCBP2P52298 156 aaKnown RBP eCLIP4.18□□□□□ -1.745e-7■■■■□ 25.1
ATXN3-229ENST00000554672 SLC29A2Q14542 456 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PDCD1Q15116 288 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PDK3Q15120 406 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 EFNB3Q15768 340 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GABRA6Q16445 453 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 VPS26BQ4G0F5 336 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GGTA1PQ4G0N0 100 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 FKBP9P1Q75LS8 142 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 THNSL2Q86YJ6 484 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GLB1L2Q8IW92 636 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ZBED8Q8IZ13 594 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 OR2L13Q8N349 312 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ZNF786Q8N393 782 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SVOPLQ8N434 492 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 C1orf52Q8N6N3 182 aaKnown RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 WDR31Q8NA23 367 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ATP6V1C2Q8NEY4 427 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 TOR1AIP2Q8NFQ8 470 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 OR6Y1Q8NGX8 325 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ACTRT1Q8TDG2 376 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GPR151Q8TDV0 419 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ZFP90Q8TF47 636 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PYROXD1Q8WU10 500 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SNX33Q8WV41 574 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 TMEM186Q96B77 213 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 APH1AQ96BI3 265 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ELP4Q96EB1 424 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ZNF764Q96H86 408 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SH3YL1Q96HL8 342 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SNX18Q96RF0 628 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 NEU1Q99519 415 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SUCNR1Q9BXA5 334 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 CDC42EP4Q9H3Q1 356 aaKnown RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 PLK3Q9H4B4 646 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 LZTFL1Q9NQ48 299 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 UBQLN4Q9NRR5 601 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 DDX18Q9NVP1 670 aaKnown RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 HIF1ANQ9NWT6 349 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 ASB6Q9NWX5 421 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 TAS2R16Q9NYV7 291 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 TAS2R7Q9NYW3 318 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 EMC3Q9P0I2 261 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 VPS29Q9UBQ0 182 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 GRID1Q9ULK0 1009 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 SNX6Q9UNH7 406 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 USP22Q9UPT9 525 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 WBP11Q9Y2W2 641 aaKnown RBP4.18□□□□□ -1.74
ATXN3-229ENST00000554672 JRKLQ9Y4A0 524 aa4.18□□□□□ -1.74
ATXN3-229ENST00000554672 IGKV3D-15A0A087WSY6 115 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 IGHV3-15A0A0B4J1V0 119 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 GNG14A0A1W2PPG7 69 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 A0A1W2PQD3 144 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 FAM159BA6NKW6 160 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 ZAR1LA6NP61 321 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 ATP6V1G2-DDX39BF2Z307 99 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 STX16-NPEPL1H3BU86 382 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 GPR171O14626 319 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 STX16O14662 325 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 MRPL33O75394 65 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 PDE5AO76074 875 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 NKX2-2O95096 273 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 SLU7O95391 586 aaKnown RBP4.17□□□□□ -1.74
ATXN3-229ENST00000554672 HSPA4LO95757 839 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 BCL10O95999 233 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 IGHV3-9P01782 118 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 C2P06681 752 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 LPLP06858 475 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 IFI6P09912 130 aa4.17□□□□□ -1.74
ATXN3-229ENST00000554672 OR4A8P0C604 315 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms