RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 ARPC3O15145 178 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 MAN1A2O60476 641 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 NPIPB7O75200 414 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 MT-ND2P03891 347 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ASAH2BP0C7U1 165 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 DBTP11182 482 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 PEPDP12955 493 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 APEHP13798 732 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF3P17036 446 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 CCNA2P20248 432 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 MASP1P48740 699 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 CYB561P49447 251 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 FOXK2Q01167 660 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF91Q05481 1191 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 TMED1Q13445 227 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 FHL1Q13642 323 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 RTP5Q14D33 572 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 NEDD8Q15843 81 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 FAM69AQ5T7M9 428 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ABHD17BQ5VST6 288 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 NXNL2Q5VZ03 156 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 OR5M10Q6IEU7 315 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 THSD4Q6ZMP0 1018 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 NANOGNBQ7Z5D8 188 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 SIRT6Q8N6T7 355 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 CLEC1AQ8NC01 280 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 THAP4Q8WY91 577 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 PSMF1Q92530 271 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 RORBQ92753 470 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZBTB8AQ96BR9 441 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 DDIT4LQ96D03 193 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 KTI12Q96EK9 354 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 C1GALT1C1Q96EU7 318 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 KLHDC3Q9BQ90 382 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 SACM1LQ9NTJ5 587 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 MRPS18AQ9NVS2 196 aaKnown RBP13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 DLL3Q9NYJ7 618 aa13.66□□□□□ -0.22
TRAPPC9-205ENST00000518839 WDFY4Q6ZS81 3184 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 IMPA2O14732 288 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 PPP1R3DO95685 299 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 BGLAPP02818 100 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 TSPAN19P0C672 248 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 CCL3P10147 92 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 LIFP15018 202 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 SDHBP21912 280 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 PCMT1P22061 227 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 PAICSP22234 425 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 NOS3P29474 1203 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 RPL4P36578 427 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 NHLH1Q02575 133 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 EMX1Q04741 257 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 ST3GAL4Q11206 333 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 FOXF1Q12946 379 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 TBCEQ15813 527 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 PLPPR5Q32ZL2 321 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 ARMC4Q5T2S8 1044 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 PRAMEF20Q5VT98 475 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 AADACL4Q5VUY2 407 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 C1orf140Q5VVS0 124 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 POMZP3Q6PJE2 187 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 CXXC5Q7LFL8 322 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 MARCH9Q86YJ5 346 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 WDSUB1Q8N9V3 476 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 OR1J4Q8NGS1 313 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 SGCDQ92629 289 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 TAAR8Q969N4 342 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 MUL1Q969V5 352 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF524Q96C55 264 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 DGCR14Q96DF8 476 aaKnown RBP13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 CRELD1Q96HD1 420 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 POTEKPQ9BYX7 375 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 AMBNQ9NP70 447 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 TIMMDC1Q9NPL8 285 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 GPR83Q9NYM4 423 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 IL20RAQ9UHF4 553 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 VDAC3Q9Y277 283 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 AHCTF1Q8WYP5 2266 aa13.65□□□□□ -0.22
TRAPPC9-205ENST00000518839 ZNF99A8MXY4 864 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 LRRN3E7EW58 273 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 PRR23D1E9PI22 279 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 MASP2O00187 686 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 PRR23D2P0DMB1 279 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 ITGA3P26006 1051 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 UQCRC1P31930 480 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 RPS5P46782 204 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 CDH11P55287 796 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 DSCR4P56555 118 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 PIGFQ07326 219 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 RAB40BQ12829 278 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 PMS2P3Q13401 168 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 RAB39AQ14964 217 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 ALG10Q5BKT4 473 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 RNLSQ5VYX0 342 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 B3GNTL1Q67FW5 361 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 ARSKQ6UWY0 536 aa13.64□□□□□ -0.23
TRAPPC9-205ENST00000518839 BEST3Q8N1M1 668 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms