RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 ZNF227Q86WZ6 799 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 CCDC103Q8IW40 242 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 APH1BQ8WW43 257 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 ZNF566Q969W8 418 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 MRPS26Q9BYN8 205 aaKnown RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 FKRPQ9H9S5 495 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 PLA2G3Q9NZ20 509 aa13.68□□□□□ -0.22
GINS3-203ENST00000426538 SPIN1Q9Y657 262 aaPredicted RBP13.68□□□□□ -0.22
GINS3-203ENST00000426538 A0A087WXM4 84 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 ZNF208O43345 1280 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 XPNPEP2O43895 674 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 FAM20BO75063 409 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 NEURL1O76050 574 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 WISP1O95388 367 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 CLPTM1O96005 669 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 MT-ATP6P00846 226 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 GABRB1P18505 474 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 TCEA1P23193 301 aaKnown RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 NOS3P29474 1203 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 RPL4P36578 427 aaKnown RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 GPR85P60893 370 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 SMN1Q16637 294 aaKnown RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 OR4Q3Q8NH05 313 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 DTNBP1Q96EV8 351 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 MOGAT1Q96PD6 335 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 SIGLEC12Q96PQ1 595 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 NPAS1Q99742 590 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ENKD1Q9H0I2 346 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 MCCC2Q9HCC0 563 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ZNF229Q9UJW7 825 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 DKKL1Q9UK85 242 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 BAIAP2Q9UQB8 552 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 MED13Q9UHV7 2174 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 SH3D21A4FU49 640 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 SHISA8B8ZZ34 492 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 PRKYO43930 277 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 NPIPB7O75200 414 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ASAH2BP0C7U1 165 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 TFPIP10646 304 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 HK1P19367 917 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 FKBP2P26885 142 aaKnown RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 CDH15P55291 814 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 GABARAPL2P60520 117 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 LTBQ06643 244 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 C3orf33Q6P1S2 294 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 THSD4Q6ZMP0 1018 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 MAMDC2Q7Z304 686 aaPredicted RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 LNX2Q8N448 690 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 DNAJA3Q96EY1 480 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 TUBA8Q9NY65 449 aaPredicted RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 BOKQ9UMX3 212 aaPredicted RBP13.67□□□□□ -0.22
GINS3-203ENST00000426538 MSRB2Q9Y3D2 182 aa13.67□□□□□ -0.22
GINS3-203ENST00000426538 ASPMQ8IZT6 3477 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 OR5H15A6NDH6 313 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 BHLHE40O14503 412 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 SURF4O15260 269 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 GRK5P34947 590 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 TUBA4AP68366 448 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 ARG2P78540 354 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 MFAP5Q13361 173 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 FHL1Q13642 323 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 C1QL3Q5VWW1 255 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 MEDAGQ5VYS4 303 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 NANOGNBQ7Z5D8 188 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 FAM26EQ8N5C1 309 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 OR5M1Q8NGP8 315 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 TMEM163Q8TC26 289 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 HAS2Q92819 552 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 FAM173AQ9BQD7 235 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 ZNF552Q9H707 407 aaPredicted RBP13.66□□□□□ -0.22
GINS3-203ENST00000426538 PLCXD1Q9NUJ7 323 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 RPH3AQ9Y2J0 694 aaPredicted RBP13.66□□□□□ -0.22
GINS3-203ENST00000426538 MPDZO75970 2070 aa13.66□□□□□ -0.22
GINS3-203ENST00000426538 TRIM64A6NGJ6 449 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 SNTNA6NMZ2 147 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 H3BML4 177 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 BGLAPP02818 100 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 PEPDP12955 493 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 CD46P15529 392 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 GTF2E2P29084 291 aaKnown RBP13.65□□□□□ -0.22
GINS3-203ENST00000426538 MLLT10P55197 1068 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 RPS4XP62701 263 aaKnown RBP13.65□□□□□ -0.22
GINS3-203ENST00000426538 EFNB1P98172 346 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 FOXK2Q01167 660 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 MFSD13AQ14CX5 517 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 OCLNQ16625 522 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 SLC35F1Q5T1Q4 408 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 DPY19L2P2Q6ZN68 376 aa13.65□□□□□ -0.22
GINS3-203ENST00000426538 GTPBP8Q8N3Z3 284 aaPredicted RBP13.65□□□□□ -0.22
GINS3-203ENST00000426538 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms