RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 CBLN3Q6UW01 205 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM107Q6UX40 140 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 TUBA1AQ71U36 451 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 IGDCC3Q8IVU1 814 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 MMGT1Q8N4V1 131 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 L3MBTL4Q8NA19 623 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 LINC01006Q8NI28 216 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 PIGXQ8TBF5 258 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 PHOSPHO1Q8TCT1 267 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 ST7LQ8TDW4 575 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 ATP6V1E2Q96A05 226 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 ZHX1-C8orf76Q96EF9 292 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
LINC00396-201ENST00000411690 CFAP36Q96G28 342 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 BOD1Q96IK1 185 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 FRG2BQ96QU4 278 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 MRPL37Q9BZE1 423 aaKnown RBP5.39□□□□□ -1.55
LINC00396-201ENST00000411690 ZCCHC4Q9H5U6 513 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 IPPKQ9H8X2 491 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 SEC61A2Q9H9S3 476 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 CAB39LQ9H9S4 337 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 SLC35C2Q9NQQ7 365 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 MMP26Q9NRE1 261 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 UBQLN4Q9NRR5 601 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 DDX18Q9NVP1 670 aaKnown RBP5.39□□□□□ -1.55
LINC00396-201ENST00000411690 TMEM45AQ9NWC5 275 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 SEC14L4Q9UDX3 406 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 SLC12A4Q9UP95 1085 aa5.39□□□□□ -1.55
LINC00396-201ENST00000411690 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
LINC00396-201ENST00000411690 SOX21Q9Y651 276 aaPredicted RBP5.39□□□□□ -1.55
LINC00396-201ENST00000411690 IGHV3OR16-10A0A075B7F0 116 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 IGHV2OR16-5A0A0B4J2B6 119 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 MDFIC2A0A1B0GVS7 189 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 CXorf49A8MYA2 514 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SRRM5B3KS81 715 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 C3orf84H3BNL1 204 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 NR5A2O00482 541 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SKAP2O75563 359 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 FOXH1O75593 365 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 PSMG1O95456 288 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 H6PDO95479 791 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 PPP1R3DO95685 299 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 IGKV3-15P01624 115 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 IGLV1-44P01699 117 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 FGGP02679 453 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 JUNP05412 331 aaKnown RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 IL3P08700 152 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 NCBP2P52298 156 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SLC16A1P53985 500 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SUMO3P55854 103 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 IFT88Q13099 833 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 GTF2H2Q13888 395 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SGO1Q5FBB7 561 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SLC25A53Q5H9E4 307 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 DEFB121Q5J5C9 76 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 GTF2H2CQ6P1K8 395 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF771Q7L3S4 317 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 ABHD12BQ7Z5M8 362 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 ISCA2Q86U28 154 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 CCDC103Q8IW40 242 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 PPIL6Q8IXY8 311 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 OR2L13Q8N349 312 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 C1orf52Q8N6N3 182 aaKnown RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 FAM169BQ8N8A8 192 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 OR52E2Q8NGJ4 325 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 OR1K1Q8NGR3 316 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 GPR119Q8TDV5 335 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 TSPAN17Q96FV3 270 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 UBXN10Q96LJ8 280 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 RBBP8Q99708 897 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 GAL3ST1Q99999 423 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SYT3Q9BQG1 590 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 MRI1Q9BV20 369 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 RHOJQ9H4E5 214 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 ZNF385DQ9H6B1 395 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 MOV10Q9HCE1 1003 aaKnown RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 NPHS2Q9NP85 383 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 LZTFL1Q9NQ48 299 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 SERINC1Q9NRX5 453 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 PURGQ9UJV8 347 aaKnown RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 CARD8Q9Y2G2 431 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 MTO1Q9Y2Z2 717 aaKnown RBP5.38□□□□□ -1.55
LINC00396-201ENST00000411690 WIPI2Q9Y4P8 454 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 CAPN6Q9Y6Q1 641 aa5.38□□□□□ -1.55
LINC00396-201ENST00000411690 ARPC4-TTLL3A0A0A6YYG9 625 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 CLDN25C9JDP6 229 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 GTPBP1O00178 669 aaKnown RBP5.37□□□□□ -1.55
LINC00396-201ENST00000411690 PLXNB1O43157 2135 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 ULK1O75385 1050 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 KRT33AO76009 404 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 KCNK2O95069 426 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 NKX2-2O95096 273 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 CELA3BP08861 270 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 ALOX5P09917 674 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 MYZAPP0CAP1 466 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 IGHV4-38-2P0DP08 117 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 TFPIP10646 304 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 NAT2P11245 290 aa5.37□□□□□ -1.55
LINC00396-201ENST00000411690 CBR1P16152 277 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms