RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 MED12Q93074 2177 aa17.56■□□□□ 0.4
AC008060.1-201ENST00000401499 CACNA1AO00555 2505 aa17.56■□□□□ 0.4
AC008060.1-201ENST00000401499 TNRC6AQ8NDV7 1962 aaKnown RBP17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 ANKRD11Q6UB99 2663 aaPredicted RBP17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 ELK4P28324 431 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 ADH6P28332 368 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 CHN2P52757 468 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 NUP107P57740 925 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 ZBED5Q49AG3 693 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 GXYLT1Q4G148 440 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 CLEC12AQ5QGZ9 265 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 C1orf140Q5VVS0 124 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 GTPBP8Q8N3Z3 284 aaPredicted RBP17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 SCMH1Q96GD3 660 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 TSSK6Q9BXA6 273 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF226Q9NYT6 803 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 HSPE1-MOB4S4R3N1 261 aa17.55■□□□□ 0.4
AC008060.1-201ENST00000401499 IGF2RP11717 2491 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF208O43345 1280 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 HCN1O60741 890 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 ASAH2BP0C7U1 165 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 SRD5A2P31213 254 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 EIF1P41567 113 aaKnown RBP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 SLC9A3P48764 834 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 RPS4XP62701 263 aaKnown RBP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 TLE3Q04726 772 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 MAD2L1BPQ15013 274 aaPredicted RBP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 SMARCD3Q6STE5 483 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 GALNTL5Q7Z4T8 443 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 C10orf53Q8N6V4 93 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 ATP6V1C2Q8NEY4 427 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 CNIH3Q8TBE1 160 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 APH1BQ8WW43 257 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 OSTF1Q92882 214 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 ARL5BQ96KC2 179 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 DCBLD2Q96PD2 775 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 BOKQ9UMX3 212 aaPredicted RBP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF337Q9Y3M9 751 aa17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 URB1O60287 2271 aaKnown RBP17.54■□□□□ 0.4
AC008060.1-201ENST00000401499 H3BML4 177 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 GABRB1P18505 474 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 RFC3P40938 356 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 TNFSF10P50591 281 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SLC27A4Q6P1M0 643 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 C5orf46Q6UWT4 87 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SMAD5Q99717 465 aaKnown RBP17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 FKRPQ9H9S5 495 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 NANSQ9NR45 359 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 RASSF1Q9NS23 344 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 KLF13Q9Y2Y9 288 aaPredicted RBP17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 NCOR2Q9Y618 2525 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 MGAQ8IWI9 3026 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 OR2M5A3KFT3 312 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 EIF4E1BA6NMX2 242 aaKnown RBP17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 FTCDNL1E5RQL4 147 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 BHLHE40O14503 412 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 RCBTB2O95199 551 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 LYNP07948 512 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 PEPDP12955 493 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 CD46P15529 392 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SHC1P29353 583 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 MAP2K6P52564 334 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SMSP52788 366 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 B3GALT5-AS1P59052 145 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 CDC42P60953 191 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SELENBP1Q13228 472 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 CDK5R2Q13319 367 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 PGGHGQ32M88 737 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SYT14P1Q58G82 188 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF766Q5HY98 468 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 FAM69AQ5T7M9 428 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 RAET1LQ5VY80 246 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 RPL13AP3Q6NVV1 102 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 C3orf33Q6P1S2 294 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 CCDC103Q8IW40 242 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF786Q8N393 782 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 DDIT4LQ96D03 193 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 C5orf34Q96MH7 638 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 TMEM185BQ9H7F4 350 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 SEC14L4Q9UDX3 406 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 ZNF229Q9UJW7 825 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 HIF3AQ9Y2N7 669 aa17.53■□□□□ 0.4
AC008060.1-201ENST00000401499 WBP4O75554 376 aaKnown RBP17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 AHSA1O95433 338 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 TSPAN19P0C672 248 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 ZNF17P17021 662 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 CD97P48960 835 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 MEOX1P50221 254 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 C19orf57Q0VDD7 668 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 TOMM20Q15388 145 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 YRDCQ86U90 279 aaKnown RBP17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 DEPDC4Q8N2C3 294 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 FAM83FQ8NEG4 500 aaPredicted RBP17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 OR2T33Q8NG76 320 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 OR52L1Q8NGH7 329 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 RHOXF1Q8NHV9 184 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 TTTY12Q9BZ98 90 aa17.52■□□□□ 0.39
AC008060.1-201ENST00000401499 OR2B2Q9GZK3 357 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms