RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Spsb2O88838 264 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Nkx2-6P43688 289 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 PitpnaP53810 271 aaKnown RBP10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Hes5P70120 167 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 TfptQ3U1J1 259 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Rnf44Q3UHJ8 407 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gm648Q3UJ22 213 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 2900092C05RikQ5I0V9 184 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Vdac3Q60931 283 aaKnown RBP10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tas2r135Q7TQA9 312 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr1359Q7TQU5 313 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc25a32Q8BMG8 316 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mmp28Q8CGV8 520 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Flywch1Q8CI03 673 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc25a42Q8R0Y8 318 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ttc36Q8VBW8 186 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lipt1Q8VCM4 373 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr952Q8VFD7 314 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr1043Q8VFK4 314 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Exosc4Q921I9 245 aaKnown RBP10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gdpd1Q9CRY7 314 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Prl8a8Q9DAS4 241 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr955Q9EQ97 314 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Pkmyt1Q9ESG9 490 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc9a3r2Q9JHL1 337 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Isg20Q9JL16 300 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 NfkbiaQ9Z1E3 314 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 CorinQ9Z319 1113 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ckap5A2AGT5 2032 aaKnown RBP10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Plxna2P70207 1894 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 D3Ertd254eA0A0G2JEM5 796 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Vmn2r108E9PYS0 855 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gm6576F6YTZ4 274 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Angpt1O08538 498 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 RaxO35602 342 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Hoxb3P09026 433 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Il1bP10749 269 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 PtgirP43252 415 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Wnt11P48615 354 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Gch1Q05915 241 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Prss57Q14B24 284 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Riiad1Q3KNY5 119 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Taar7bQ5QD11 358 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 HlxQ61670 476 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 ParpbpQ6IRT3 573 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 JamlQ80UL9 379 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Pou6f2Q8BJI4 691 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mettl6Q8BVH9 282 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Dnajc22Q8CHS2 339 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fbxl8Q8CIG9 374 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tmem185bQ8R3R5 350 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Glb1lQ8VC60 646 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ccm2lQ8VCC6 481 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr160Q8VGE3 309 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zmynd19Q9CQG3 227 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Mgat4cQ9D306 478 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Arfgap1Q9EPJ9 414 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr655E9Q252 308 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zfp395E9Q5N9 508 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Bcl2a1dO55179 172 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 P03987 398 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zfp60P16374 707 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Crmp1P97427 572 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 March9Q3TZ87 348 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ankub1Q3UUE9 192 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Wdr20Q3UWE6 569 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lcn3Q62471 182 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ptp4a1Q63739 173 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 IppkQ6P1C1 489 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Scgb1c1Q7M742 95 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc34a3Q80SU6 601 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Clba1Q8BHN9 321 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Oscp1Q8BHW2 379 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zbtb26Q8C8S0 451 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fam149aQ8CFV2 787 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 H1fntQ8CJI4 398 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Olfr583Q8VG25 319 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fam69bQ99ML4 431 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Rab3bQ9CZT8 219 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fam122cQ9D5J5 180 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Phyhd1Q9DB26 291 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cyp11a1Q9QZ82 526 aa10.73□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Zbtb34A2ATY4 518 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Chrna10B2RX82 447 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 GlsD3Z7P3 674 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Cfl1P18760 166 aaKnown RBP10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tead3P70210 439 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Lingo2Q3URE9 606 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Spire1Q52KF3 598 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Foxd3Q61060 465 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Sntb2Q61235 520 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Fmr1nbQ80ZA7 238 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 OacylQ8BML2 685 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Trmt6Q8CE96 497 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Slc16a14Q8K1C7 512 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 MepceQ8K3A9 666 aaKnown RBP10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Ubqln1Q8R317 582 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Tmem5Q8VDX6 444 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Satb2Q8VI24 733 aa10.72□□□□□ -0.69
Col9a1-202ENSMUST00000088349 Vmn1r85Q8VIB8 308 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms