RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GNPTGQ9UJJ9 305 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TRAF3IP3Q9Y228 551 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 TRAPPC4Q9Y296 219 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 ABCC9O60706 1549 aa1.76□□□□□ -2.13
SMCHD1-206ENST00000581631 PDS5BQ9NTI5 1447 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ATP10DQ9P241 1426 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 FRMPD4Q14CM0 1322 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 SPAG7O75391 227 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 IGFBP3P17936 291 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 PGCP20142 388 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 TPSB2P20231 275 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 TBXA2RP21731 343 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 CXCR2P25025 360 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 DNAJB1P25685 340 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ANXA13P27216 316 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 SHMT2P34897 504 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 VDAC2P45880 294 aaPredicted RBP1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ASMTP46597 345 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 TFPI2P48307 235 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 EFNB2P52799 333 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 NUCB2P80303 420 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 TPSAB1Q15661 275 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 C11orf71Q6IPW1 123 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 LRRC8BQ6P9F7 803 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 CBLN3Q6UW01 205 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ISLR2Q6UXK2 745 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 TICAM2Q86XR7 235 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 RDH10Q8IZV5 341 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 LYPD1Q8N2G4 141 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 FTMTQ8N4E7 242 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ATP6V0D2Q8N8Y2 350 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 NPBQ8NG41 125 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 OR10G2Q8NGC3 310 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 OR6C4Q8NGE1 309 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 OR2L8Q8NGY9 312 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 FICDQ9BVA6 458 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ROGDIQ9GZN7 287 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 NXF5Q9H1B4 397 aaKnown RBP1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 SMYD3Q9H7B4 428 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 CALHM2Q9HA72 323 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 SLC25A37Q9NYZ2 338 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF835Q9Y2P0 537 aa1.75□□□□□ -2.13
SMCHD1-206ENST00000581631 NCAPD2Q15021 1401 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 IGKV1D-17A0A075B6S4 117 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 IGHV1OR21-1A0A087WYE8 117 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 KIR2DL5BA0A0G2JN68 375 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 KIR2DL5BA0A0G2JPC4 375 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 A0A1B0GUS0 222 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 IDSB3KWA1 339 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CLDN5O00501 218 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CTAGE5O15320 804 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 TPST2O60704 377 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 BAG2O95816 211 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 RETP07949 1114 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 UQCRC2P22695 453 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 PSMA2P25787 234 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 ATP6V1E1P36543 226 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 HPCAL1P37235 193 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 NMUP48645 174 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 DAP3P51398 398 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 FAM83EQ2M2I3 478 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 BOLA3Q53S33 107 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 TIGD3Q6B0B8 471 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 SYT10Q6XYQ8 523 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 PRSS41Q7RTY9 318 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF571Q7Z3V5 609 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 TTC5Q8N0Z6 440 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 KIR2DL5AQ8N109 375 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CYB561D1Q8N8Q1 229 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 OR10G3Q8NGC4 313 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 FGF11Q92914 225 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 TSNARE1Q96NA8 513 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CCNL2Q96S94 520 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 P2RY13Q9BPV8 354 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 C20orf85Q9H1P6 137 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CDC42EP4Q9H3Q1 356 aaKnown RBP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 DMAP1Q9NPF5 467 aaPredicted RBP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 LHX9Q9NQ69 397 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 CCL28Q9NRJ3 127 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 AATFQ9NY61 560 aaKnown RBP eCLIP1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 GSTK1Q9Y2Q3 226 aa1.74□□□□□ -2.13
SMCHD1-206ENST00000581631 COL1A2P08123 1366 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SH3TC1Q8TE82 1336 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 A0A0G2JN53 185 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 DCTN6O00399 190 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 AGPAT2O15120 278 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 CHADO15335 359 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SS18L1O75177 396 aaPredicted RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 SEC22BO75396 215 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 STAMBPO95630 424 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 IGKV1-17P01599 117 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 ZNF286BP0CG31 522 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 POLR2EP19388 210 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 FMO3P31513 532 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 YWHABP31946 246 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 CAMLGP49069 296 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 DLX1P56177 255 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 GMFBP60983 142 aa1.73□□□□□ -2.13
SMCHD1-206ENST00000581631 ACTA2P62736 377 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms