RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 ATP6V1HQ9UI12 483 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 SLC35A3Q9Y2D2 325 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 ALPK2Q86TB3 2170 aa7.84□□□□□ -1.15
SMG6-218ENST00000575454 OR6C65A6NJZ3 312 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 KLF11O14901 512 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 KCNAB3O43448 404 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 STX11O75558 287 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 KRT33AO76009 404 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 GUSBP08236 651 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 UBTFL6P0CB48 400 aaPredicted RBP7.83□□□□□ -1.16
SMG6-218ENST00000575454 HOXB1P14653 301 aaPredicted RBP7.83□□□□□ -1.16
SMG6-218ENST00000575454 IFNGR1P15260 489 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 CASQ1P31415 396 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 NTF4P34130 210 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 H3F3AP84243 136 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SLC7A5Q01650 507 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SLC17A1Q14916 467 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 RFTN2Q52LD8 501 aaPredicted RBP7.83□□□□□ -1.16
SMG6-218ENST00000575454 TSPO2Q5TGU0 170 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 C9orf135Q5VTT2 229 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 ANKRD16Q6P6B7 361 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SHQ1Q6PI26 577 aaKnown RBP7.83□□□□□ -1.16
SMG6-218ENST00000575454 ZYG11AQ6WRX3 759 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 RINLQ6ZS11 566 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 ZNF572Q7Z3I7 529 aaPredicted RBP7.83□□□□□ -1.16
SMG6-218ENST00000575454 CCDC103Q8IW40 242 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 NUP37Q8NFH4 326 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 CLHC1Q8NHS4 586 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 UBASH3BQ8TF42 649 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 TMEM45BQ96B21 275 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 ZNF524Q96C55 264 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 DDIT4LQ96D03 193 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 ARL5BQ96KC2 179 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SNX18Q96RF0 628 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SDF2Q99470 211 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 FMO2Q99518 471 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 KCNF1Q9H3M0 494 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 ZNF442Q9H7R0 627 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 CTPS2Q9NRF8 586 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 SLC7A10Q9NS82 523 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 EXD2Q9NVH0 621 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 BAIAP2L1Q9UHR4 511 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 PCDHB10Q9UN67 800 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 PCDHGB4Q9UN71 923 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 GRIP1Q9Y3R0 1128 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 FLVCR1Q9Y5Y0 555 aa7.83□□□□□ -1.16
SMG6-218ENST00000575454 EXPH5Q8NEV8 1989 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 IGHV1-18A0A0C4DH31 117 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 G3V2L1 256 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 AZIN1O14977 448 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 SCAMP2O15127 329 aaKnown RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 ZNF208O43345 1280 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 LYPLA1O75608 230 aaPredicted RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 AGR2O95994 175 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 ABHD2P08910 425 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 BCKDHAP12694 445 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 CR1P17927 2039 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 NPR2P20594 1047 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 IL2RGP31785 369 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 FOXG1P55316 489 aaPredicted RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 RPL38P63173 70 aaKnown RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 SLC25A3Q00325 362 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 CKAP4Q07065 602 aaKnown RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 RIN1Q13671 783 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 GPR68Q15743 365 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 CCDC153Q494R4 210 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 HIKESHIQ53FT3 197 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 PRR31Q5SQ13 230 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 VHLLQ6RSH7 139 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 PAQR6Q6TCH4 344 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 OR7D2Q96RA2 312 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 SF3B5Q9BWJ5 86 aaKnown RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 DYNLRB1Q9NP97 96 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 EXOSC3Q9NQT5 275 aaKnown RBP7.82□□□□□ -1.16
SMG6-218ENST00000575454 POLE3Q9NRF9 147 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 HIF1ANQ9NWT6 349 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 PRDM4Q9UKN5 801 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 SPEF1Q9Y4P9 236 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 KCNE3Q9Y6H6 103 aa7.82□□□□□ -1.16
SMG6-218ENST00000575454 PRR14LQ5THK1 2151 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 ARPC4-TTLL3A0A0A6YYG9 625 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 ZNF587BE7ETH6 402 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 hCG_2039718K7EN88 272 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 LSM1O15116 133 aaKnown RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 FCMRO60667 390 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 GLRA3O75311 464 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 UGT2B17O75795 530 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 SLU7O95391 586 aaKnown RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 TFP02787 698 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 LINC00032P0C843 101 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 LAMP1P11279 417 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 CDH2P19022 906 aaPredicted RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 EFNA1P20827 205 aaPredicted RBP7.81□□□□□ -1.16
SMG6-218ENST00000575454 MATN1P21941 496 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 RYKP34925 604 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 PGM1P36871 562 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 CCT5P48643 541 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 HILS1P60008 231 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 NAAAQ02083 359 aa7.81□□□□□ -1.16
SMG6-218ENST00000575454 POU3F1Q03052 451 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms