RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 NME6O75414 186 aaPredicted RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 WBP4O75554 376 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 OR5F1O95221 314 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 AIFM1O95831 613 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OPN1SWP03999 348 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 HMGN1P05114 100 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 HMGN2P05204 90 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 RPLP0P05388 317 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 HTR1AP08908 422 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CTSEP14091 401 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 MMP9P14780 707 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PSMB9P28065 219 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 MAT2AP31153 395 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 FMO3P31513 532 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OR1E2P47887 323 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 FASLGP48023 281 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 IDH2P48735 452 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 GP2P55259 537 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 BTN3A2P78410 334 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 RHAGQ02094 409 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PPP1R8Q12972 351 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 C1DQ13901 141 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 NR1D2Q14995 579 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 GPAT3Q53EU6 434 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 KLHL22Q53GT1 634 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 FGD3Q5JSP0 725 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 ENTPD8Q5MY95 495 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 SERTAD4-AS1Q5TG53 156 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 C12orf73Q69YU5 71 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 RPL13AP3Q6NVV1 102 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 DUS1LQ6P1R4 473 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 FBXO42Q6P3S6 717 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 ZNF793Q6ZN11 406 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CFAP77Q6ZQR2 320 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 Q6ZSR6 202 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 USP43Q70EL4 1123 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 C16orf62Q7Z3J2 963 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 GPAT4Q86UL3 456 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 DTX1Q86Y01 620 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PLD3Q8IV08 490 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 RNF113BQ8IZP6 322 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 CARFQ8N187 725 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 SLC44A3Q8N4M1 653 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CLDN22Q8N7P3 220 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CDRT4Q8N9R6 151 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 SMYD1Q8NB12 490 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OR10Q1Q8NGQ4 319 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OR8K5Q8NH50 307 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 ZNF675Q8TD23 568 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 FAM3CQ92520 227 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 GGHQ92820 318 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 KLK6Q92876 244 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OSTF1Q92882 214 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 RFKQ969G6 155 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 LGALS12Q96DT0 336 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CNRIP1Q96F85 164 aaPredicted RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 MARS2Q96GW9 593 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 ZNF681Q96N22 645 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 SLC38A2Q96QD8 506 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 OR2A5Q96R48 311 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PELOQ9BRX2 385 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 DCUN1D5Q9BTE7 237 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 RPP25Q9BUL9 199 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 POLDIP3Q9BY77 421 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 SYNDIG1Q9H7V2 258 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 FZD3Q9NPG1 666 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 ISYNA1Q9NPH2 558 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 TRIM36Q9NQ86 728 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 FBXO8Q9NRD0 319 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 DUSP22Q9NRW4 184 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 SLC22A11Q9NSA0 550 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 C14orf105Q9NVL8 296 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 TEX10Q9NXF1 929 aaPredicted RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 EPHA6Q9UF33 1036 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 ERGIC3Q9Y282 383 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 MRPS33Q9Y291 106 aaKnown RBP6.62□□□□□ -1.35
MARK3-212ENST00000558223 ATG4BQ9Y4P1 393 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 CKAP5Q14008 2032 aa6.62□□□□□ -1.35
MARK3-212ENST00000558223 PCM1Q15154 2024 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 ANTXRLA6NF34 631 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 EPOPA6NHQ4 379 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 PSMD9O00233 223 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 BTN3A3O00478 584 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 KPNA4O00629 521 aaPredicted RBP6.61□□□□□ -1.35
MARK3-212ENST00000558223 HOXA3O43365 443 aaPredicted RBP6.61□□□□□ -1.35
MARK3-212ENST00000558223 NKX2-2O95096 273 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 MT-ND2P03891 347 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 ATP1B1P05026 303 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 DBIP07108 87 aaKnown RBP6.61□□□□□ -1.35
MARK3-212ENST00000558223 INHBBP09529 407 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 ALOX5P09917 674 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 UGT2B7P16662 529 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 CD36P16671 472 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 ZNF182P17025 639 aaPredicted RBP6.61□□□□□ -1.35
MARK3-212ENST00000558223 ELAVL4P26378 380 aaKnown RBP6.61□□□□□ -1.35
MARK3-212ENST00000558223 CD40LGP29965 261 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 CDAP32320 146 aa6.61□□□□□ -1.35
MARK3-212ENST00000558223 CSTF2P33240 577 aaKnown RBP eCLIP6.61□□□□□ -1.35
MARK3-212ENST00000558223 SOX6P35712 828 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms