RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 H3F3AP84243 136 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 GABRA6Q16445 453 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 MAPK14Q16539 360 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 PGS1Q32NB8 556 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 TTMPQ5BVD1 217 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 TYW3Q6IPR3 259 aaKnown RBP11.3□□□□□ -0.6
PTCH1-218ENST00000548945 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 C17orf78Q8N4C9 275 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 C1orf162Q8NEQ5 155 aaPredicted RBP11.3□□□□□ -0.6
PTCH1-218ENST00000548945 OR52N5Q8NH56 324 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 ZNF563Q8TA94 476 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 TCP10LQ8TDR4 215 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 INPP5KQ9BT40 448 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 PARPBPQ9NWS1 579 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 DCTN4Q9UJW0 460 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 WDR45Q9Y484 360 aa11.3□□□□□ -0.6
PTCH1-218ENST00000548945 PDLIM1O00151 329 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 EIF1BO60739 113 aaKnown RBP11.29□□□□□ -0.6
PTCH1-218ENST00000548945 SCN2BO60939 215 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 IGHV3-9P01782 118 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 ITGA5P08648 1049 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 UQCRC2P22695 453 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 NTF4P34130 210 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 THBS2P35442 1172 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 FABP6P51161 128 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 CHRNEQ04844 493 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 TNFAIP8L3Q5GJ75 292 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 OR4F3Q6IEY1 312 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 FRRS1Q6ZNA5 592 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 ADGRG3Q86Y34 549 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 CLECL1Q8IZS7 167 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 ARFGAP2Q8N6H7 521 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 VPS37AQ8NEZ2 397 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 OR4A15Q8NGL6 344 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 FAM168AQ92567 244 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 PROX1Q92786 737 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 PMM1Q92871 262 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 ROPN1LQ96C74 230 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 TLCD1Q96CP7 247 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 ARL5BQ96KC2 179 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 OR51I1Q9H343 314 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 FKRPQ9H9S5 495 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 TMEM181Q9P2C4 612 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 LPAR3Q9UBY5 353 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 PRDM4Q9UKN5 801 aa11.29□□□□□ -0.6
PTCH1-218ENST00000548945 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 M0R1B8 84 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 FAAHO00519 579 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 ZNF208O43345 1280 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 BPGMP07738 259 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 OR12D1P0DN82 309 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 PTNP21246 168 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 KHKP50053 298 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 EFNA4P52798 201 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 CASP9P55211 416 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 SLC35A1P78382 337 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 KCNJ10P78508 379 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 TXNL4AP83876 142 aaKnown RBP11.28□□□□□ -0.6
PTCH1-218ENST00000548945 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 CHRNB3Q05901 458 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 SPOCK1Q08629 439 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 DPY19L1Q2PZI1 675 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 ANXA8L1Q5VT79 327 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 SAXO2Q658L1 398 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 B3GLCTQ6Y288 498 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 WDR31Q8NA23 367 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 C10orf105Q8TEF2 133 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 XAGE5Q8WWM1 108 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 TESCQ96BS2 214 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 NEURL3Q96EH8 262 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 SLC17A5Q9NRA2 495 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.28□□□□□ -0.6
PTCH1-218ENST00000548945 SLC9A8Q9Y2E8 581 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 AMDHD2Q9Y303 409 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 FLVCR1Q9Y5Y0 555 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 PMF1-BGLAPU3KQ54 211 aa11.28□□□□□ -0.6
PTCH1-218ENST00000548945 PHF1O43189 567 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 BCAS1O75363 584 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 SPAG7O75391 227 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 SNUPNO95149 360 aaKnown RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 F12P00748 615 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 APOBEC3AP31941 199 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 RYKP34925 604 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 ETV4P43268 484 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 OR2B6P58173 313 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 HPCAP84074 193 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 FUT5Q11128 374 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 SLC17A1Q14916 467 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 CYB5R2Q6BCY4 276 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 TNFAIP8L2Q6P589 184 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-218ENST00000548945 CASP12Q6UXS9 341 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 OLIG3Q7RTU3 272 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 CCDC103Q8IW40 242 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 CLEC4FQ8N1N0 589 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 ZNF525Q8N782 197 aa11.27□□□□□ -0.61
PTCH1-218ENST00000548945 NANOS1Q8WY41 292 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms