RNA–Protein interactions for RNA: ENST00000510817.1

TMEM173-208, Transcript of transmembrane protein 173, human

TSL 2

Gene TMEM173, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM173-208	ENST00000510817	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	FRMD7	Q6ZUT3	714 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	GLCCI1	Q86VQ1	547 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	TMCO5A	Q8N6Q1	288 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	ZIC4	Q8N9L1	334 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR4F15	Q8NGB8	312 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR2T11	Q8NH01	316 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	UBASH3B	Q8TF42	649 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	WDR60	Q8WVS4	1066 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	TMEM186	Q96B77	213 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	TSSK3	Q96PN8	268 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	TMEM181	Q9P2C4	612 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	UPB1	Q9UBR1	384 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	BAIAP2L1	Q9UHR4	511 aa		11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	SPIN1	Q9Y657	262 aa	Predicted RBP	11.8	□□□□□ -0.52
TMEM173-208	ENST00000510817	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817		A0A0G2JK05	382 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	SLC28A1	O00337	649 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	KLF11	O14901	512 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	EIF1B	O60739	113 aa	Known RBP	11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	UGT2B17	O75795	530 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	CRYAA	P02489	173 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	UROS	P10746	265 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	EFNA1	P20827	205 aa	Predicted RBP	11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	CALCR	P30988	508 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	PGM1	P36871	562 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	CCT3	P49368	545 aa	Known RBP	11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	CCR4	P51679	360 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	WHAMMP3	Q1A5X7	153 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	HIKESHI	Q53FT3	197 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	CASP12	Q6UXS9	341 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	GRINA	Q7Z429	371 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	ZNF614	Q8N883	585 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	MNS1	Q8NEH6	495 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR56A1	Q8NGH5	318 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	OIT3	Q8WWZ8	545 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR5P2	Q8WZ92	322 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR7D2	Q96RA2	312 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	OR11A1	Q9GZK7	315 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	PIF1	Q9H611	641 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	HIF1AN	Q9NWT6	349 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	EMCN	Q9ULC0	261 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	FAF1	Q9UNN5	650 aa	Predicted RBP	11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	PTGDR2	Q9Y5Y4	395 aa		11.79	□□□□□ -0.52
TMEM173-208	ENST00000510817	POC1B-GALNT4	F8VUJ3	575 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	hCG_2039718	K7EN88	272 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	DYNC1I1	O14576	645 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	FCMR	O60667	390 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	BCAS1	O75363	584 aa	Predicted RBP	11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	IGKV3-15	P01624	115 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	GSTA1	P08263	222 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	CECR9	P0C854	216 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	TFPI	P10646	304 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	IMPDH2	P12268	514 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	IFNGR1	P15260	489 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	DEFA6	Q01524	100 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	PLAUR	Q03405	335 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	PDCD2	Q16342	344 aa	Predicted RBP	11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	TBRG1	Q3YBR2	411 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	POMGNT2	Q8NAT1	580 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	SFXN5	Q8TD22	340 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	BCL2L2	Q92843	193 aa	Predicted RBP	11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	CCDC126	Q96EE4	140 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	CHMP6	Q96FZ7	201 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	NELFA	Q9H3P2	528 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	TUBB1	Q9H4B7	451 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	SERHL2	Q9H4I8	314 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	USP22	Q9UPT9	525 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	TMED5	Q9Y3A6	229 aa		11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	NUP214	P35658	2090 aa	Predicted RBP	11.78	□□□□□ -0.52
TMEM173-208	ENST00000510817	LSM1	O15116	133 aa	Known RBP	11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	CSTA	P01040	98 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	ERCC1	P07992	297 aa	Predicted RBP	11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	MSMB	P08118	114 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	UBTFL6	P0CB48	400 aa	Predicted RBP	11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	LAMP1	P11279	417 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	BCKDHA	P12694	445 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	THBS4	P35443	961 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	SLC1A3	P43003	542 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	DNAJB13	P59910	316 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	SLC35A1	P78382	337 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	SLC7A5	Q01650	507 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	CKAP4	Q07065	602 aa	Known RBP	11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	CCNI	Q14094	377 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	MAPK14	Q16539	360 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	TUSC1	Q2TAM9	212 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	ARHGAP11B	Q3KRB8	267 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	ELFN2	Q5R3F8	820 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	EMB	Q6PCB8	327 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	PAQR6	Q6TCH4	344 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	KLHL24	Q6TFL4	600 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	SHISA2	Q6UWI4	295 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	ZYG11A	Q6WRX3	759 aa		11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	EIF3M	Q7L2H7	374 aa	Known RBP	11.77	□□□□□ -0.53
TMEM173-208	ENST00000510817	CCNYL1	Q8N7R7	359 aa		11.77	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms