RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	SLC46A3	Q7Z3Q1	461 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	ELOA3	Q8NG57	546 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	STK35	Q8TDR2	534 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	GTPBP3	Q969Y2	492 aa	Known RBP	10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	ZBTB8A	Q96BR9	441 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	FAM46A	Q96IP4	442 aa	Known RBP	10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	PITX2	Q99697	317 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	ADI1	Q9BV57	179 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	UCK2	Q9BZX2	261 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	GRIP2	Q9C0E4	1043 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	OR2B2	Q9GZK3	357 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	PAPOLB	Q9NRJ5	636 aa	Known RBP	10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	KIF17	Q9P2E2	1029 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	RAB26	Q9ULW5	256 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	BOK	Q9UMX3	212 aa	Predicted RBP	10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	VDAC3	Q9Y277	283 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	TMEM5	Q9Y2B1	443 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	AP4B1	Q9Y6B7	739 aa		10.99	□□□□□ -0.65
MATR3-231	ENST00000502394	ENO4	A6NNW6	628 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	SHISA8	B8ZZ34	492 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394		H0YAE9	185 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF208	O43345	1280 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	SUSD5	O60279	629 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	IFI30	P13284	250 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	OSM	P13725	252 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	POU2F1	P14859	743 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ACADS	P16219	412 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF17	P17021	662 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	GSTM3	P21266	225 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ELK4	P28324	431 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	EPHA2	P29317	976 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	EIF1	P41567	113 aa	Known RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	GPR4	P46093	362 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	CD97	P48960	835 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	MAP2K6	P52564	334 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	TMPRSS3	P57727	454 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	B3GALT5-AS1	P59052	145 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ESRRG	P62508	458 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	LTB	Q06643	244 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	NPRL3	Q12980	569 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	TBR1	Q16650	682 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZIK1	Q3SY52	487 aa	Predicted RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF766	Q5HY98	468 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	C5orf46	Q6UWT4	87 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	LRRC69	Q6ZNQ3	347 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	RASSF6	Q6ZTQ3	369 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	RRM2B	Q7LG56	351 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	GALNTL5	Q7Z4T8	443 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	GALNT5	Q7Z7M9	940 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	MEX3D	Q86XN8	651 aa	Known RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	KIF18B	Q86Y91	864 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	P3H2	Q8IVL5	708 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	CHERP	Q8IWX8	916 aa	Known RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	DHRSX	Q8N5I4	330 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	CLDN22	Q8N7P3	220 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZFP62	Q8NB50	900 aa	Predicted RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	OR6S1	Q8NH40	331 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	RNF217	Q8TC41	542 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	BPIFA2	Q96DR5	249 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	PTDSS2	Q9BVG9	487 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF556	Q9HAH1	456 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	FAM118A	Q9NWS6	357 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	CHRNA9	Q9UGM1	479 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	PCDHGB7	Q9Y5F8	929 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	CACNA1G	O43497	2377 aa		10.98	□□□□□ -0.65
MATR3-231	ENST00000502394	LOC400499	M0QZD8	3231 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	ZC3H12D	A2A288	527 aa	Known RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394		A8MVM7	634 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	FAM47E-STBD1	D6RA91	191 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	KPNA4	O00629	521 aa	Predicted RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	DENR	O43583	198 aa	Known RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	PTP4A3	O75365	173 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	OR7A10	O76100	309 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	BGLAP	P02818	100 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	PDGFA	P04085	211 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	TSPAN19	P0C672	248 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	SNRPB	P14678	240 aa	Known RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	CDH2	P19022	906 aa	Predicted RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	HK1	P19367	917 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	IL11	P20809	199 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	CHM	P24386	653 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	CXCR1	P25024	350 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	CAPG	P40121	348 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	MEOX1	P50221	254 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	FXYD6P3	P58550	94 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	CRYZ	Q08257	329 aa	Known RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF74	Q16587	644 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	C6orf52	Q5T4I8	152 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	BORA	Q6PGQ7	559 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	ZNF620	Q6ZNG0	422 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	TMEM178A	Q8NBL3	297 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	KTI12	Q96EK9	354 aa	Predicted RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	SGTB	Q96EQ0	304 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	JSRP1	Q96MG2	331 aa	Predicted RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	C5orf34	Q96MH7	638 aa		10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	UBL7	Q96S82	380 aa	Predicted RBP	10.97	□□□□□ -0.65
MATR3-231	ENST00000502394	ARHGAP9	Q9BRR9	750 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms