RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CHRNA9Q9UGM1 479 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 PRSS50Q9UI38 385 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 MKLN1Q9UL63 735 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ABCA1O95477 2261 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 DPRXA6NFQ7 191 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 A8MV72 311 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 ZNF814B7Z6K7 855 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 M0R1B8 84 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 OVOL3O00110 214 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ETV2O00321 342 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 DNPH1O43598 174 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 KIAA0513O60268 411 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 RAMP1O60894 148 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CPSF4O95639 269 aaKnown RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 IGHV4-39P01824 125 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 SERPINE1P05121 402 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 NUDT17P0C025 328 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 DANCRP0C864 163 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 COX5AP20674 150 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 IGHV1-2P23083 117 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 PTAFRP25105 342 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 MAGEA8P43361 318 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 HTR3AP46098 478 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 FABP6P51161 128 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CLNS1AP54105 237 aaKnown RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 CLDN8P56748 225 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 OR2B6P58173 313 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 EMX2Q04743 252 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CHRNB3Q05901 458 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 RAB35Q15286 201 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 SMU1Q2TAY7 513 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 PGGHGQ32M88 737 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ARHGAP11BQ3KRB8 267 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CHRFAM7AQ494W8 412 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 GPAT3Q53EU6 434 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ABLIM2Q6H8Q1 611 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 OR4F3Q6IEY1 312 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 OR7E24Q6IFN5 339 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 HMBOX1Q6NT76 420 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 PODNL1Q6PEZ8 512 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 DNAJC14Q6Y2X3 702 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 GRINAQ7Z429 371 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ATG4DQ86TL0 474 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 DTX2Q86UW9 622 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 RIMKLAQ8IXN7 391 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CLECL1Q8IZS7 167 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 LILRB1Q8NHL6 650 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 SPATA3Q8NHX4 192 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 DDIT4LQ96D03 193 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 C3orf30Q96M34 536 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ZIM3Q96PE6 472 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 KCNS3Q9BQ31 491 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 TRAF4Q9BUZ4 470 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 CACNG6Q9BXT2 260 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 OR51I1Q9H343 314 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 PARPBPQ9NWS1 579 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ASIC5Q9NY37 505 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 TAS2R16Q9NYV7 291 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 UPB1Q9UBR1 384 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 MARCOQ9UEW3 520 aaPredicted RBP6.85□□□□□ -1.31
VPS50-204ENST00000438395 LGALS13Q9UHV8 139 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 ZDHHC2Q9UIJ5 367 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 SLC9A8Q9Y2E8 581 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 HDGFL3Q9Y3E1 203 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 CADP27708 2225 aa6.85□□□□□ -1.31
VPS50-204ENST00000438395 NBEAL1Q6ZS30 2694 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 PLCE1Q9P212 2302 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 IGKV3D-15A0A087WSY6 115 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 PRSS51A0A1B0GVH4 220 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 SHISA9B4DS77 424 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CD5LO43866 347 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 FCMRO60667 390 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 EIF1BO60739 113 aaKnown RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 UGT2B17O75795 530 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 KRT33AO76009 404 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 SNUPNO95149 360 aaKnown RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 PMS2P2O95744 297 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 BPGMP07738 259 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 OR12D1P0DN82 309 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CCNA2P20248 432 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 PTNP21246 168 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 UQCRC2P22695 453 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 S100A3P33764 101 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CLK1P49759 484 aaKnown RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 CASP9P55211 416 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 PDK3Q15120 406 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CHI3L2Q15782 390 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 KRT71Q3SY84 523 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 ABHD12BQ7Z5M8 362 aaPredicted RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 CMIPQ8IY22 773 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 CLEC4FQ8N1N0 589 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 MUC15Q8N387 334 aa6.84□□□□□ -1.31
VPS50-204ENST00000438395 ZNF433Q8N7K0 673 aaPredicted RBP6.84□□□□□ -1.31
VPS50-204ENST00000438395 MIPOL1Q8TD10 442 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms