RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 SDHAF3Q9NRP4 125 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IL20RAQ9UHF4 553 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SAMD4AQ9UPU9 718 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 FAM32AQ9Y421 112 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 AP4S1Q9Y587 144 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 LYVE1Q9Y5Y7 322 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 A0A087WUJ7 227 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TMED7-TICAM2A0A0A6YYA0 188 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ACOT7O00154 380 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TNFSF11O14788 317 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SEC14L5O43304 696 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TGM6O95932 706 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IGHG3P01860 377 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IFNW1P05000 195 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 HLA-DOBP13765 273 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ELAVL4P26378 380 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 SRD5A2P31213 254 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 POLR2IP36954 125 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 RPS5P46782 204 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 IL1RL1Q01638 556 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CBFBQ13951 182 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 EIF2S3LQ2VIR3 472 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 TBCELQ5QJ74 424 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RTL6Q6ICC9 239 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZNF770Q6IQ21 691 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 PIWIL3Q7Z3Z3 882 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 EID3Q8N140 333 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 GTPBP8Q8N3Z3 284 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 FAM109AQ8N4B1 249 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TOR1AIP2Q8NFQ8 470 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 NEIL3Q8TAT5 605 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 NRG4Q8WWG1 115 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 WDYHV1Q96HA8 205 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 OR2B2Q9GZK3 357 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PTGES2Q9H7Z7 377 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC24A3Q9HC58 644 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 S100A14Q9HCY8 104 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ACKR4Q9NPB9 350 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 B4GALT7Q9UBV7 327 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TINAGQ9UJW2 476 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ANAPC2Q9UJX6 822 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RPS6KA6Q9UK32 745 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ING1Q9UK53 422 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 AP3M1Q9Y2T2 418 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TMED7Q9Y3B3 224 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PCDHGB7Q9Y5F8 929 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 POLQO75417 2590 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ROS1P08922 2347 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 APCP25054 2843 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ABCA12Q86UK0 2595 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 IMPA2O14732 288 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TFECO14948 347 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 AQP8O94778 261 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CST1P01037 141 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 GASTP01350 101 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FABP3P05413 133 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 RAP2AP10114 183 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SLC7A1P30825 629 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 AGFG1P52594 562 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 DLX5P56178 289 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ALDH6A1Q02252 535 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 KCNC4Q03721 635 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 EXOC3L2Q2M3D2 409 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MTX3Q5HYI7 312 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 WBP2NLQ6ICG8 309 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SLC30A8Q8IWU4 369 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MARVELD2Q8N4S9 558 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CPT1CQ8TCG5 803 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 GEMIN6Q8WXD5 167 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 DUS3LQ96G46 650 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 RSRC1Q96IZ7 334 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 DHRS1Q96LJ7 313 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 NIPSNAP1Q9BPW8 284 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SMURF2Q9HAU4 748 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 AGPAT4Q9NRZ5 378 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ARMC1Q9NVT9 282 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SH3BGRL2Q9UJC5 107 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 DKKL1Q9UK85 242 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 BOKQ9UMX3 212 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 PHF3Q92576 2039 aaKnown RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 TRGV5A0A0B4J1U4 118 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FTCDNL1E5RQL4 147 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FAAHO00519 579 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 SUSD5O60279 629 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TP53P04637 393 aaPredicted RBP3.61□□□□□ -1.83
LIG4-201ENST00000356922 RNF224P0DH78 156 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TFPIP10646 304 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 RHCEP18577 417 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PGCP20142 388 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 FPR1P21462 350 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 P2RY4P51582 365 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 HMGA2P52926 109 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 PSPHP78330 225 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 TLE1Q04724 770 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 CHRNB3Q05901 458 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 MYBPHQ13203 477 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 LRRC36Q1X8D7 754 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 LPCAT4Q643R3 524 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 ULK3Q6PHR2 472 aa3.61□□□□□ -1.83
LIG4-201ENST00000356922 NHLRC1Q6VVB1 395 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms