RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 FAM180BQ6P0A1 224 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 ABHD13Q7L211 337 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 SIRT6Q8N6T7 355 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 SMRP1Q8NCR6 262 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 OR51Q1Q8NH59 317 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 LILRB1Q8NHL6 650 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 FAM174AQ8TBP5 190 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 DIO2Q92813 273 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 TM4SF19Q96DZ7 209 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CNRIP1Q96F85 164 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 ELMOD3Q96FG2 381 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 FAM46AQ96IP4 442 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 FCRL4Q96PJ5 515 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 OR2A7Q96R45 310 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 TIMP4Q99727 224 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 GSDMCQ9BYG8 508 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 NLGN3Q9NZ94 848 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 PIPOXQ9P0Z9 390 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 NTMQ9P121 344 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC13A4Q9UKG4 626 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 CA5BQ9Y2D0 317 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 PRELID3BQ9Y3B1 194 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 SPACA6W5XKT8 324 aa9.98□□□□□ -0.81
CHRNA1-201ENST00000261007 KIR2DS5A0A0G2JLQ3 304 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 A0A0G2JNG1 304 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 OR2M5A3KFT3 312 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SNRPGP15A8MWD9 76 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PRAMEF26H0Y7S4 382 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 H3BUI4 141 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 KIR2DS3K7RE56 304 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PPM1DO15297 605 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 GALR3O60755 368 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TOXO94900 526 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 IL5P05113 134 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 HMGN2P05204 90 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PROS1P07225 676 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ALPPL2P10696 532 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 AK4P27144 223 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 AP3S2P59780 193 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TNFRSF17Q02223 184 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 DLX2Q07687 328 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 HLXQ14774 488 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 LASP1Q14847 261 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 KIR2DS5Q14953 304 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ZMYND11Q15326 602 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PRRT3Q5FWE3 981 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CLVS2Q5SYC1 327 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 MEPCEQ7L2J0 689 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 VN1R4Q7Z5H5 301 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CCDC116Q8IYX3 515 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 NUP43Q8NFH3 380 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 OR2T33Q8NG76 320 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 OR51G2Q8NGK0 314 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ACOT11Q8WXI4 607 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 KAT2AQ92830 837 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ELP4Q96EB1 424 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CXorf58Q96LI9 332 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF681Q96N22 645 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ZFP3Q96NJ6 502 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 UTP23Q9BRU9 249 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ACTRT3Q9BYD9 372 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CDCP1Q9H5V8 836 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 LYRM4Q9HD34 91 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 HINT3Q9NQE9 182 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ACTR10Q9NZ32 417 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CNIH4Q9P003 139 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TCRBV21S2A2A0A5A6 115 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 DAPL1A0PJW8 107 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 MPTX1A8MV57 137 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 C4orf51C9J302 202 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SOCS6O14544 535 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PDCD5O14737 125 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 B3GALT2O43825 422 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 TMEM127O75204 238 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 RP2O75695 350 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SEMA4FO95754 770 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CH25HO95992 272 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SERPINA3P01011 423 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 IGLV3-19P01714 112 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 LPLP06858 475 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SMIM10L1P0DMW3 83 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PPP3CBP16298 524 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 S100A11P31949 105 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 GDNFP39905 211 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CBX5P45973 191 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 MECP2P51608 486 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 PRKAG1P54619 331 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ALG11Q2TAA5 492 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 SLC25A35Q3KQZ1 300 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF311Q5JNZ3 666 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 C18orf63Q68DL7 685 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 LRFN4Q6PJG9 635 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 GLDNQ6ZMI3 551 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 ZNF620Q6ZNG0 422 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 Q6ZTK2 550 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 RD3Q7Z3Z2 195 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 CPOQ8IVL8 374 aa9.97□□□□□ -0.81
CHRNA1-201ENST00000261007 LRRC25Q8N386 305 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms