RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Commd3Q63829 195 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Htr1aQ64264 421 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Tmem202Q80W35 275 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Gm9999Q8C5Y2 53 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cldn34aG3UW52 211 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Btg1P62325 171 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cxcl17Q5UW37 119 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Bend7Q8BSV3 434 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 DrgxQ8BYH0 263 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Ubox5Q925F4 539 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 1700029P11RikQ9CQ68 150 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cd209fD3Z1H5 274 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Amy2a1E9PV85 245 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Tspan15F7BWT7 294 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Alx3O70137 343 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cyp1a2P00186 513 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Amy2P00688 508 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cd8aP01731 247 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 H2-K1P01901 369 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 MakQ04859 622 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Zar1Q80SU3 361 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Rims3Q80U57 307 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Creg2Q8BGC9 288 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 NagsQ8R4H7 527 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Clstn3Q99JH7 956 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Arpc5Q9CPW4 151 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Il23aQ9EQ14 196 aa21.79■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cyp8b1O88962 500 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 SparcP07214 302 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 GhrhrP32082 423 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Olfr787Q7TRI1 312 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Pbx4Q99NE9 378 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 RgrQ9Z2B3 291 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 B3galt1O54904 326 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Eci1P42125 289 aaKnown RBP21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Mccc2Q3ULD5 563 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Kirrel2Q7TSU7 700 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Fbxo45Q8K3B1 286 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Ifi27l2bQ8VC49 283 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Efcab10Q9D581 132 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Gjd2O54851 321 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 NfkbieO54910 364 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Dmp1O55188 503 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Il1r2P27931 410 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Grxcr1Q50H32 290 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Olfr948Q9EQ95 321 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Plek2Q9WV52 353 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Rgs11Q9Z2H1 443 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Igfbp2P47877 305 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Anxa7Q07076 463 aaKnown RBP21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Ankrd28Q505D1 1053 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Tsr3Q5HZH2 323 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Elavl3Q60900 367 aaKnown RBP21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Arhgef4Q7TNR9 484 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Vangl1Q80Z96 526 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Gal3st1Q9JHE4 423 aa21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Zc3h8Q9JJ48 305 aaKnown RBP21.78■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Myh7Q91Z83 1935 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 BC034090A0A087WP46 1202 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Vmn1r16K7N775 303 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Tssk2O54863 358 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 NpntQ91V88 561 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Taar1Q923Y8 332 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Gstp3F6RWR5 210 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Slc16a5G5E8K6 468 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Zfp872Q3UVL3 465 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Six4Q61321 775 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Nptx1Q62443 432 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 OmgQ63912 440 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Rab43Q8CG50 210 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 DhrsxQ8VBZ0 335 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Grk6O70293 576 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Has2P70312 552 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cdk2P97377 346 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Mmp7Q10738 264 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Pgap2Q3TQR0 254 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Entpd6Q3U0P5 455 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 MlipQ5FW52 269 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cdh20Q9Z0M3 801 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Cldn6Q9Z262 219 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 MbpP04370 250 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Fam117bQ3U3E2 584 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Fbxw16Q497Z0 464 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Dcaf13Q6PAC3 445 aaKnown RBP21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Clec9aQ8BRU4 238 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 H2-Q4Q8HWB2 354 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 RbksQ8R1Q9 323 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Ash2lQ91X20 623 aa21.77■■□□□ 1.08
Sh3rf1-201ENSMUST00000034060 Lcn11A2BHR2 178 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Olfr769Q8K501 312 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Med6Q921D4 246 aaKnown RBP21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Arpc5lQ9D898 153 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Olfr710Q9EP55 310 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Nxpe3B9EKK6 559 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Fbxw24E9PXM9 466 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Olfr1249L7MU51 318 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Tk1P04184 233 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Ssr4Q62186 172 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Adgrd1Q80T32 903 aa21.76■■□□□ 1.07
Sh3rf1-201ENSMUST00000034060 Cldn34b3Q80ZS5 209 aa21.76■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms